Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6TEK5 | Vkorc1l1 | Vitamin K epoxide reductase complex … | Mus musculus (Mouse) | 176 aa |
Protein Details: Q6TEK5 (Vkorc1l1)
Protein Information
| Accession | Q6TEK5 |
|---|---|
| Protein Names | Vitamin K epoxide reductase complex subunit 1-like protein 1 (VKORC1-like protein 1) (EC 1.17.4.4) |
| Gene Symbol | Vkorc1l1 |
| Organism | Mus musculus (Mouse) |
| Length | 176 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAPVLLRVS11VPRWERVARY21AVCAAGILLS31IYAYHVEREK41ERDPEHRALC
51-10051DLGPWVKCSA61ALASRWGRGF71GLLGSIFGKD81GVLNQPNSVF91GLIFYILQLL
101-150101LGMTASAVAA111LVLMTSSIVS121VVGSLYLAYI131LYFVLKEFCI141ICVTTYVLNF
151-176151LLLIINYKRL161VYLNEAWKRQ171LQPKED
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 23 | Vitamin K epoxide reductase complex subunit 1 | - | - |
Deep-Palm: 0.92
|
|
| 50 | SWISSPALM DBPTM CYSMODDB | Vitamin K epoxide reductase family Vitamin K epoxide reductase complex subunit 1 VKOR domain superfamily |
Liver
(28526873)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.97
|
| 58 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 139 | - | - | - |
Deep-Palm: 0.05
|
|
| 142 | - | - | - |
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.222
4/4 (100.0%)
2
Testis
Specificity: 0.111
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.667
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.