Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6VN19 | Ranbp10 | Ran-binding protein 10 (RanBP10) | Mus musculus (Mouse) | 620 aa |
Protein Details: Q6VN19 (Ranbp10)
Protein Information
| Accession | Q6VN19 |
|---|---|
| Protein Names | Ran-binding protein 10 (RanBP10) |
| Gene Symbol | Ranbp10 |
| Organism | Mus musculus (Mouse) |
| Length | 620 aa |
| Isoforms | No isoforms |
| Related PMIDs | 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAATADPGA11GNPQAGDSSG21GDSGGGLPSP31GEQELSRRLQ41RLYPAVNQHE
51-10051TPLPRSWSPK61DKYNYIGLSQ71GNLRVHYKGH81GKNHKDAASV91RATHPIPAAC
101-150101GIYYFEVKIV111SKGRDGYMGI121GLSAQGVNMN131RLPGWDKHSY141GYHGDDGHSF
151-200151CSSGTGQPYG161PTFTTGDVIG171CCVNLINGTC181FYTKNGHSLG191IAFTDLPANL
201-250201YPTVGLQTPG211EIVDANFGQQ221PFLFDIEDYM231REWRAKVQGT241VHGFPISARL
251-300251GEWQAVLQNM261VSSYLVHHGY271CSTATAFARM281TETPIQEEQA291SIKNRQKIQK
301-350301LVLEGRVGEA311IETTQRFYPG321LLEHNPNLLF331MLKCRQFVEM341VNGTDSEVRS
351-400351LSSRSPKSQD361SYPGSPSLSP371RHGPSSSHIH381NTGADSPSCS391NGVASTKNKQ
401-450401NHSKYPAPSS411SSSSSSSSSS421SSPSSVNYSE431SNSTDSTKSQ441PHSSTSNQET
451-500451SDSEMEMEAE461HYPNGVLESV471STRIVNGAYK481HDDLQTDESS491MDDGHPRRQL
501-550501CGGNQAATER511IILFGRELQA521LSEQLGREYG531KNLAHTEMLQ541DAFSLLAYSD
551-600551PWSCPVGHQL561DPIQREPVCA571ALNSAILESQ581NLPKQPPLML591ALGQASECLR
601-620601LMARAGLGSC611SFARVDDYLH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 100 | - | - | - |
Deep-Palm: 0.85
|
|
| 151 | - | - | - |
Deep-Palm: 0.05
|
|
| 171 | - | - | - |
Deep-Palm: 0.05
|
|
| 172 | - | - | - |
Deep-Palm: 0.03
|
|
| 180 | - | - | - |
Deep-Palm: 0.10
|
|
| 271 | - | - | - |
Deep-Palm: 0.14
|
|
| 334 | - | - | - |
Deep-Palm: 0.78
|
|
| 389 | - | - | - |
Deep-Palm: 0.14
|
|
| 501 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
| - |
Deep-Palm: 0.81
|
| 554 | - | - | - |
Deep-Palm: 0.82
|
|
| 569 | - | - | - |
Deep-Palm: 0.91
|
|
| 598 | - | - | - |
Deep-Palm: 0.98
|
|
| 610 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.36
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.