Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q6XVG2 | Cyp2c54 | Cytochrome P450 2C54 (EC 1.14.14.1) … | Mus musculus (Mouse) | 490 aa |
Protein Details: Q6XVG2 (Cyp2c54)
Protein Information
| Accession | Q6XVG2 |
|---|---|
| Protein Names | Cytochrome P450 2C54 (EC 1.14.14.1) (CYPIIC54) |
| Gene Symbol | Cyp2c54 |
| Organism | Mus musculus (Mouse) |
| Length | 490 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDPILVLVLT11LSCLFLLSLW21RQSYERGKLP31PGPTPLPIIG41NILQIDVKDI
51-10051CQSFTNLSRV61YGPVYTLYLG71RKPTVVLHGY81EAVKEALVDH91GDVFAGRGRL
101-150101PVFDKATNGM111GIGFSNGSVW121KNTRHFSLMT131LRNLGMGKRS141IEDRVQEEAR
151-200151CLVEELRKTN161GSPCDPTFIL171GCAPCNVICS181IIFQDRFDYK191DRDFLNLLEK
201-250201LDEISKILST211PWLQVCNTFP221ALLDYCPGSH231NQFFKNYAYI241KNFLLEKIRE
251-300251HKESLDVTIP261RDFIDYFLIK271GAQEDDNHPL281KNNFEHLAIT291VTDLFIGGTE
301-350301SMSTTLRYAL311LLLLKYPHVT321AKVQEEIEHV331IGKHRRPCMQ341DRSHMPYTNA
351-400351MIHEVQRFID361LVPNNLPHEV371TCDIKFRNYF381IPKGTTVITS391LSSVLRDSKE
401-450401FPNPEKFDPG411HFLDENGKFK421KSDYFMPFST431GKRICAGEGL441ARMELFLFLT
451-490451SILQNFNLKP461LVHPKDIDIT471PMLIGLGSVP481PAFQLCFIPS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.80
|
|
| 51 | SWISSPALM DBPTM CYSMODDB | Cytochrome P450 superfamily CYTOCHROME P450 FAMILY 1 Cytochrome P450 |
Liver
(28526873)
| - |
GPS-Palm: 0.91
Deep-Palm: 0.91
|
| 151 | SWISSPALM DBPTM CYSMODDB | Cytochrome P450 |
Liver
(28526873)
| - |
Deep-Palm: 0.97
|
| 164 | - | - |
Liver
(37925639)
|
Deep-Palm: 0.86
|
|
| 172 | - | - |
Liver
(37925639)
|
Deep-Palm: 0.58
|
|
| 175 | - | - |
Liver
(37925639)
|
Deep-Palm: 0.53
|
|
| 179 | - | - |
Liver
(37925639)
|
Deep-Palm: 0.26
|
|
| 216 | - | - | - |
Deep-Palm: 0.71
|
|
| 226 | - | - | - |
Deep-Palm: 0.13
|
|
| 338 | - | - | - |
Deep-Palm: 0.05
|
|
| 372 | SWISSPALM DBPTM CYSMODDB | Cytochrome P450 |
liver
(26165157)
Liver
(28526873)
| - |
Deep-Palm: 0.67
|
| 435 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.96
|
|
| 486 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Liver
Specificity: 1.000
6/6 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.