Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q7L9B9 | EEPD1 | Endonuclease/exonuclease/phosphatase family domain-containing protein 1 | Homo sapiens (Human) | 569 aa |
Protein Details: Q7L9B9 (EEPD1)
Protein Information
| Accession | Q7L9B9 |
|---|---|
| Protein Names | Endonuclease/exonuclease/phosphatase family domain-containing protein 1 |
| Gene Symbol | EEPD1 |
| Organism | Homo sapiens (Human) |
| Length | 569 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 31382980 32944167 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGSTLGCHRS11IPRDPSDLSH21SRKFSAACNF31SNILVNQERL41NINTATEEEL
51-10051MTLPGVTRAV61ARSIVEYREY71IGGFKKVEDL81ALVSGVGATK91LEQVKFEICV
101-150101SSKGSSAQHS111PSSLRRDLLA121EQQPHHLATA131VPLTPRVNIN141TATPAQLMSV
151-200151RGLSEKMALS161IVDFRREHGP171FRSVEDLVRM181DGINAAFLDR191IRHQVFAERS
201-250201RPPSTHTNGG211LTFTAKPHPS221PTSLSLQSED231LDLPPGGPTQ241IISTRPSVEA
251-300251FGGTRDGRPV261LRLATWNLQG271CSVEKANNPG281VREVVCMTLL291ENSIKLLAVQ
301-350301ELLDREALEK311FCTELNQPTL321PNIRKWKGPR331GCWKAVVAEK341PSSQLQKGAG
351-400351YAGFLWDAAA361GMELRDAGSQ371ESSPSNGHGK381LAGPSPYLGR391FKVGSHDLTL
401-450401VNLHLAALTL411LGSENPSKNH421SDGHRLASFA431QTLQETLKGE441KDVIILGDFG
451-500451QGPDSNDYDI461LRKEKFHHLI471PAHTFTNIST481KNPQGSKSLD491NIWISKSLKK
501-550501VFTGHWAVVR511EGLTNPWIPD521NWSWGGVASE531HCPVLAEFYT541EKDWSKKDAP
551-569551RNGSGVALER561SEANIKHER
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.03
|
| 28 | Endonuclease/exonuclease/phosphatase family domain-containing protein 1 | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.79
|
|
| 99 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.92
|
|
| 271 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.95
|
|
| 286 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.95
|
|
| 312 | - | - | - |
Deep-Palm: 0.97
|
|
| 332 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.88
|
|
| 532 | - | - | - |
Deep-Palm: 0.14
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
PC3
Specificity: 0.444
4/4 (100.0%)
3
LNCaP
Specificity: 0.333
3/3 (100.0%)
1
U937 cell
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
LNCaP cells (Mass)
Specificity: 0.111
1/4 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 67 | Y → C | 0.001969 | SNP | Missense Mutation | LGG |
| 70 | Y → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 104 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 165 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 271 | C → S | 0.002506 | SNP | Missense Mutation | COAD |
| 272 | S → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 493 | W → C | 0.001764 | SNP | Missense Mutation | LUAD |