Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q7LGC8 | CHST3 | Carbohydrate sulfotransferase 3 (EC 2.8.2.17) … | Homo sapiens (Human) | 479 aa |
Protein Details: Q7LGC8 (CHST3)
Protein Information
| Accession | Q7LGC8 |
|---|---|
| Protein Names | Carbohydrate sulfotransferase 3 (EC 2.8.2.17) (EC 2.8.2.21) (Chondroitin 6-O-sulfotransferase 1) (C6ST-1) (Chondroitin 6-sulfotransferase) (C6ST) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 0) (GST-0) |
| Gene Symbol | CHST3 |
| Organism | Homo sapiens (Human) |
| Length | 479 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEKGLTLPQD11CRDFVHSLKM21RSKYALFLVF31VVIVFVFIEK41ENKIISRVSD
51-10051KLKQIPQALA61DANSTDPALI71LAENASLLSL81SELDSAFSQL91QSRLRNLSLQ
101-150101LGVEPAMEAA111GEEEEEQRKE121EEPPRPAVAG131PRRHVLLMAT141TRTGSSFVGE
151-200151FFNQQGNIFY161LFEPLWHIER171TVSFEPGGAN181AAGSALVYRD191VLKQLFLCDL
201-250201YVLEHFITPL211PEDHLTQFMF221RRGSSRSLCE231DPVCTPFVKK241VFEKYHCKNR
251-300251RCGPLNVTLA261AEACRRKEHM271ALKAVRIRQL281EFLQPLAEDP291RLDLRVIQLV
301-350301RDPRAVLASR311MVAFAGKYKT321WKKWLDDEGQ331DGLREEEVQR341LRGNCESIRL
351-400351SAELGLRQPA361WLRGRYMLVR371YEDVARGPLQ381KAREMYRFAG391IPLTPQVEDW
401-450401IQKNTQAAHD411GSGIYSTQKN421SSEQFEKWRF431SMPFKLAQVV441QAACGPAMRL
451-479451FGYKLARDAA461ALTNRSVSLL471EERGTFWVT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 11 | - |
HeLa
(37611173)
| - |
GPS-Palm: 0.73
Deep-Palm: 0.09
|
|
| 198 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.93
|
|
| 229 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.88
|
|
| 234 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.77
|
|
| 247 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.72
|
|
| 252 | - | - | - |
Deep-Palm: 0.83
|
|
| 264 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.95
|
|
| 345 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.98
|
|
| 444 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 142 | R → C | 0.002020 | SNP | Missense Mutation | PRAD |
| 183 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 221 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 229 | C → C | 0.004219 | SNP | Silent | SARC |
| 252 | C → C | 0.002020 | SNP | Silent | PRAD |
| 264 | C → C | 0.002506 | SNP | Silent | COAD |
| 310 | R → C | 0.007299 | SNP | Missense Mutation | READ |
| 429 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 444 | C → C | 0.002506 | SNP | Silent | COAD |