Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q7M759 | Abhd17b | Alpha/beta hydrolase domain-containing protein 17B … | Mus musculus (Mouse) | 288 aa |
Protein Details: Q7M759 (Abhd17b)
Protein Information
| Accession | Q7M759 |
|---|---|
| Protein Names | Alpha/beta hydrolase domain-containing protein 17B (Abhydrolase domain-containing protein 17B) (EC 3.1.2.22) |
| Gene Symbol | Abhd17b |
| Organism | Mus musculus (Mouse) |
| Length | 288 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29733200 31772009 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MNNLSFSELC11CLFCCPPCPG21KIASKLAFLP31PDPTYTLMCD41ESGSRWTLHL
51-10051SERADWQYSS61REKDAIECFM71TRTSKGNRIA81CMFVRCSPNA91KYTLLFSHGN
101-150101AVDLGQMSSF111YIGLGSRINC121NIFSYDYSGY131GASSGKPTEK141NLYADVEAAW
151-200151LALRTRYGIR161PENVIIYGQS171IGTVPSVDLA181ARYESAAVIL191HSPLTSGMRV
201-250201AFPDTKKTYC211FDAFPNIDKI221SKITSPVLII231HGTEDEVIDF241SHGLALFERC
251-288251QRPVEPLWVE261GAGHNDVELY271GQYLERLKQF281VSQELVNL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 10 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.03
|
|
| 11 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.04
|
|
| 14 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.52
|
|
| 15 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.65
|
|
| 18 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.83
|
|
| 39 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.84
|
|
| 68 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.46
|
|
| 81 | - | - | - |
Deep-Palm: 0.46
|
|
| 86 | - | - | - |
Deep-Palm: 0.69
|
|
| 120 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.26
|
| 210 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.57
|
| 250 | - | - | - |
Deep-Palm: 0.86
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.385
5
Brain
Specificity: 0.135
5/5 (100.0%)
5
Liver
Specificity: 0.135
5/5 (100.0%)
2
Testis
Specificity: 0.054
2/2 (100.0%)
1
NSC
Specificity: 0.027
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
24
Brain tissue (Mass)
Specificity: 0.649
24/56 (42.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.