Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q7TME0 | Plppr4 | Phospholipid phosphatase-related protein type 4 … | Mus musculus (Mouse) | 766 aa |
Protein Details: Q7TME0 (Plppr4)
Protein Information
| Accession | Q7TME0 |
|---|---|
| Protein Names | Phospholipid phosphatase-related protein type 4 (Brain-specific phosphatidic acid phosphatase-like protein 1) (Inactive 2-lysophosphatidate phosphatase PLPPR4) (Lipid phosphate phosphatase-related protein type 4) (Plasticity-related gene 1 protein) (PRG-1) |
| Gene Symbol | Plppr4 |
| Organism | Mus musculus (Mouse) |
| Length | 766 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 34200797 35358180 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQRAGSSGAR11GECDISGAGR21LRLEQAARLG31GRTVHTSPGG41GLGARQAAGM
51-10051SAKERPKGKV61IKDSVTLLPC71FYFVELPILA81SSVVSLYFLE91LTDVFKPVHS
101-150101GFSCYDRSLS111MPYIEPTQEA121IPFLMLLSLA131FAGPAITIMV141GEGILYCCLS
151-200151KRRNGAGLEP161NINAGGCNFN171SFLRRAVRFV181GVHVFGLCST191ALITDIIQLS
201-250201TGYQAPYFLT211VCKPNYTSLN221VSCKENSYIV231EDICSGSDLT241VINSGRKSFP
251-300251SQHATLAAFA261AVYVSMYFNS271TLTDSSKLLK281PLLVFTFIIC291GIICGLTRIT
301-350301QYKNHPVDVY311CGFLIGGGIA321LYLGLYAVGN331FLPSEDSMLQ341HRDALRSLTD
351-400351LNQDPSRVLS361AKNGSSGDGI371AHTEGILNRN381HRDASSLTNL391KRANADVEII
401-450401TPRSPMGKES411MVTFSNTLPR421ANTPSVEDPV431RRNASIHASM441DSARSKQLLT
451-500451QWKSKNESRK461MSLQVMDTEP471EGQSPPRSIE481MRSSSEPSRV491GVNGDHHVPG
501-550501NQYLKIQPGT511VPGCNNSMPG521GPRVSIQSRP531GSSQLVHIPE541ETQENISTSP
551-600551KSSSARAKWL561KAAEKTVACN571RSNNQPRIMQ581VIAMSKQQGV591LQSSPKNAEG
601-650601STVTCTGSIR611YKTLTDHEPS621GIVRVEAHPE631NNRPIIQIPS641STEGEGSGSW
651-700651KWKAPEKSSL661RQTYELNDLN671RDSESCESLK681DSFGSGDRKR691SNIDSNEHHH
701-750701HGITTIRVTP711VEGSEIGSET721LSVSSSRDST731LRRKGNIILI741PERSNSPENT
751-766751RNIFYKGTSP761TRAYKD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.90
Deep-Palm: 0.68
|
|
| 70 | - | - | - |
Deep-Palm: 0.96
|
|
| 104 | - | - | - |
Deep-Palm: 0.65
|
|
| 147 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.95
|
|
| 148 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.92
|
|
| 167 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
| - |
Deep-Palm: 0.93
|
| 188 | - | - | - |
Deep-Palm: 0.86
|
|
| 212 | - | - | - |
Deep-Palm: 0.42
|
|
| 223 | - | - | - |
Deep-Palm: 0.11
|
|
| 234 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.55
|
|
| 290 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.92
|
|
| 294 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.33
|
|
| 311 | - | - | - |
Deep-Palm: 0.27
|
|
| 514 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.57
|
|
| 569 | - | - | - |
Deep-Palm: 0.93
|
|
| 605 | - |
Brain
(34200797)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.78
|
|
| 676 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.83
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Brain
Specificity: 0.143
4/4 (100.0%)
2
Testis
Specificity: 0.071
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
22
Brain tissue (Mass)
Specificity: 0.786
22/56 (39.3%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.