Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q7TMG8 | Nipsnap2 | Glioblastoma amplified sequence (Nipsnap homolog … | Mus musculus (Mouse) | 281 aa |
Protein Details: Q7TMG8 (Nipsnap2)
Protein Information
| Accession | Q7TMG8 |
|---|---|
| Protein Names | Glioblastoma amplified sequence (Nipsnap homolog 2) |
| Gene Symbol | Nipsnap2 |
| Organism | Mus musculus (Mouse) |
| Length | 281 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAARVLLARG11GLLRPAAQSG21FLPGLRTVTS31SSHRAREDSW41LKSLFVRKVD
51-10051PRKDAHSNLL61AKKETSSLYK71LQFHNVKPEC81LDAYNKICQE91VLPKIHEGKQ
101-150101YPCTLVGTWN111TWYGEQDQAV121HLWRYEGGYP131ALTEVMNKLK141ENQEFVNFRK
151-200151ARSDMLLSRK161NQLLLEFSFW171NEPVPRPGPN181IYELRSYQLR191PGTMIEWGNY
201-250201WARAIRFRQD211SNEAVGGFFS221QIGQLYMVHH231LWAYKDLQTR241EDIRNAAWHK
251-281251HGWEELVYYT261VPLIQEMESR271IMIPLKTSPL281Q
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 80 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.91
|
|
| 88 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.70
Deep-Palm: 0.86
|
|
| 103 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.16
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
21
Brain tissue (Mass)
Specificity: 1.000
21/56 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.