Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q7TMM9 | Tubb2a | Tubulin beta-2A chain | Mus musculus (Mouse) | 445 aa |
Protein Details: Q7TMM9 (Tubb2a)
Protein Information
| Accession | Q7TMM9 |
|---|---|
| Protein Names | Tubulin beta-2A chain |
| Gene Symbol | Tubb2a |
| Organism | Mus musculus (Mouse) |
| Length | 445 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MREIVHIQAG11QCGNQIGAKF21WEVISDEHGI31DPTGSYHGDS41DLQLERINVY
51-10051YNEAAGNKYV61PRAILVDLEP71GTMDSVRSGP81FGQIFRPDNF91VFGQSGAGNN
101-150101WAKGHYTEGA111ELVDSVLDVV121RKESESCDCL131QGFQLTHSLG141GGTGSGMGTL
151-200151LISKIREEYP161DRIMNTFSVM171PSPKVSDTVV181EPYNATLSVH191QLVENTDETY
201-250201SIDNEALYDI211CFRTLKLTTP221TYGDLNHLVS231ATMSGVTTCL241RFPGQLNADL
251-300251RKLAVNMVPF261PRLHFFMPGF271APLTSRGSQQ281YRALTVPELT291QQMFDSKNMM
301-350301AACDPRHGRY311LTVAAIFRGR321MSMKEVDEQM331LNVQNKNSSY341FVEWIPNNVK
351-400351TAVCDIPPRG361LKMSATFIGN371STAIQELFKR381ISEQFTAMFR391RKAFLHWYTG
401-445401EGMDEMEFTE411AESNMNDLVS421EYQQYQDATA431DEQGEFEEEE441GEDEA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 12 | SWISSPALM DBPTM CYSMODDB | OS01G0282866 PROTEIN Tubulin/FtsZ, GTPase domain superfamily Tubulin/FtsZ family GTPase domain |
Liver
(28526873)
Brain
(31311849)
| - |
Deep-Palm: 0.03
|
| 127 | Tubulin/FtsZ family GTPase domain |
Brain
(34200797)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.82
|
|
| 129 | Tubulin/FtsZ family GTPase domain |
Brain
(34200797)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.88
|
|
| 211 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.39
|
|
| 239 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.90
Deep-Palm: 0.97
|
| 303 | SWISSPALM DBPTM CYSMODDB | Tubulin C-terminal domain |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.57
|
| 354 | SWISSPALM DBPTM CYSMODDB | Tubulin C-terminal domain |
Brain
(31311849)
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.68
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.455
5
Brain
Specificity: 0.119
5/5 (100.0%)
4
Liver
Specificity: 0.095
4/4 (100.0%)
2
Testis
Specificity: 0.048
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
31
Brain tissue (Mass)
Specificity: 0.738
31/56 (55.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.