Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q80TE7 | Lrrc7 | Leucine-rich repeat-containing protein 7 (Densin-180) … | Mus musculus (Mouse) | 1490 aa |
Protein Details: Q80TE7 (Lrrc7)
Protein Information
| Accession | Q80TE7 |
|---|---|
| Protein Names | Leucine-rich repeat-containing protein 7 (Densin-180) (Densin) (Protein LAP1) |
| Gene Symbol | Lrrc7 |
| Organism | Mus musculus (Mouse) |
| Length | 1490 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTTKRKLIGR11LVPCRCFRGE21EEIISVLDYS31HCSLQQVPKE41VFNFERTLEE
51-10051LYLDANQIEE61LPKQLFNCQA71LRKLSIPDND81LSSLPTSIAS91LVNLKELDIS
101-150101KNGVQEFPEN111IKCCKCLTII121EASVNPISKL131PDGFTQLLNL141TQLYLNDAFL
151-200151EFLPANFGRL161VKLRILELRE171NHLKTLPKSM181HKLAQLERLD191LGNNEFSELP
201-250201EVLDQIQNLR211ELWMDNNALQ221VLPGSIGKLK231MLVYLDMSKN241RIETVDMDIS
251-300251GCEALEDLLL261SSNMLQQLPD271SIGLLKKLTT281LKVDDNQLTM291LPNTIGNLSL
301-350301LEEFDCSCNE311LESLPPTIGY321LHSLRTLAVD331ENFLPELPRE341IGSCKNVTVM
351-400351SLRSNKLEFL361PEEIGQMQRL371RVLNLSDNRL381KNLPFSFTKL391KELAALWLSD
401-450401NQSKALIPLQ411TEAHPETKQR421VLTNYMFPQQ431PRGDEDFQSD441SDSFNPTLWE
451-500451EQRQQRMTVA461FEFEDKKEDD471ESAGKVKALS481CQAPWDRGQR491GITLQPARLS
501-550501GDCCTPWARC511DQQIQDMPVP521QSDPQLAWGC531ISGLQQERSM541CAPLPVAAQS
551-600551TTLPSLSGRQ561VEINLKRYPT571PYPEDLKNMV581KSVQNLVGKP591SHGVRVENSN
601-650601PTANTEQTVK611EKFEHKWPVA621PKEITVEDSF631VHPANEMRIG641ELHPSLAETP
651-700651LYPPKLVLLG661KDKKESTDES671EVDKTHCLNN681SVSSGTYSDY691SPSQASSASS
701-750701NTRMKVGSLQ711ATAKDAVHNS721LWGNRIAPPF731PQPLDAKPLL741SQREAVPPGN
751-800751IPQRPDRLPM761SDAFPDNWTD771GSHYDNTGFV781SEEAAGENAN791NNPLLSSKAR
801-850801SVPAHGRRPL811IRQERIVGVP821LELEQSTHRH831TPETEVPPSN841PWQNWTRTPS
851-900851PFEDRTAFPS861KLETTPTTSP871LPERKDHMKE881PTETPGPFSP891GVPWEYHDPT
901-950901PNRSLGNVFS911QIHCRPDSSK921GVIAISKSTE931RLSPLMKDIK941SNKFKKSQSI
951-1000951DEIDVGTYKV961YNIPLENYAS971GSDHLGSHER981PDKFLGPEHG991MSSMSRSQSV
1001-10501001PMLDDEMLMY1011GSSKGPPQQK1021ASMTKKVYQF1031DQSFNPQGAV1041EVKAEKRIPP
1051-11001051PFAHNSEYVQ1061QPSKNIAKDL1071VSPRAYRGYP1081PMEQMFSFSQ1091PSVNEDAMVN
1101-11501101AQFASQGPRA1111GFLRRADSLA1121SSTEMAMFRR1131VSEPHELPPG1141DRYGRATYRG
1151-12001151GLEGQSSISM1161TDPQFLKRNG1171RYEDEHPSYQ1181EVKAQAGSFP1191AKNLTQRRPL
1201-12501201SARSYSTESY1211GASQTRPVSA1221RPTMAALLEK1231IPSDYNLGNY1241GDKTSDNSDI
1251-13001251KTRPTPVKGE1261ESCGKMPADW1271RQQLLRHIEA1281RRLDRTPSQQ1291SNILDNGQED
1301-13501301VSPSGQWNPY1311PLGRRDVPPD1321TITKKAGSHI1331QTLMGSQSLQ1341HRSREQQPYE
1351-14001351GNINKVTIQQ1361FQSPLPIQIP1371SSQATRGPQP1381GRCLIQTKGQ1391RSMDGYPEQF
1401-14501401CVRIEKNPGL1411GFSISGGISG1421QGNPFKPSDK1431GIFVTRVQPD1441GPASNLLQPG
1451-14901451DKILQANGHS1461FVHMEHEKAV1471LLLKSFQNTV1481DLVIQRELTV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.93
|
|
| 16 | - |
Brain
(34200797)
| - |
GPS-Palm: 0.92
Deep-Palm: 0.96
|
|
| 32 | SWISSPALM DBPTM CYSMODDB | Synaptic Scaffolding LAP/MAGUK Families |
Brain
(31311849)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.76
|
| 68 | SWISSPALM DBPTM CYSMODDB | Leucine rich repeat |
Forebrain
(28680068)
|
Brain
(31311849)
|
GPS-Palm: 0.94
Deep-Palm: 0.96
|
| 113 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.55
|
|
| 114 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.61
|
|
| 116 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.67
|
|
| 252 | - | - | - |
Deep-Palm: 0.76
|
|
| 306 | - | - | - |
Deep-Palm: 0.72
|
|
| 308 | - | - | - |
Deep-Palm: 0.55
|
|
| 344 | - | - | - |
Deep-Palm: 0.98
|
|
| 481 | - |
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.95
|
|
| 503 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.65
|
|
| 504 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.60
|
|
| 510 | - | - | - |
Deep-Palm: 0.12
|
|
| 530 | - | - | - |
Deep-Palm: 0.54
|
|
| 541 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.85
|
|
| 677 | - | - | - |
Deep-Palm: 0.25
|
|
| 914 | - |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.62
|
|
| 1263 | - |
Brain
(31311849)
|
Brain
(31311849)
|
Deep-Palm: 0.81
|
|
| 1383 | - | - | - |
Deep-Palm: 0.65
|
|
| 1401 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.73
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Brain
Specificity: 0.160
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.952
20
Brain tissue (Mass)
Specificity: 0.800
20/56 (35.7%)
1
Neural Stem Cells (Mass)
Specificity: 0.040
1/1 (100.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.