Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q80UG2 | Plxna4 | Plexin-A4 | Mus musculus (Mouse) | 1893 aa |
Protein Details: Q80UG2 (Plxna4)
Protein Information
| Accession | Q80UG2 |
|---|---|
| Protein Names | Plexin-A4 |
| Gene Symbol | Plxna4 |
| Organism | Mus musculus (Mouse) |
| Length | 1893 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKAMPWNWTC11LLSHLLVVGM21GSSTLLPRQP31PQLSQKPSFV41TFRGEPAEGF
51-10051NHLVVDERTG61HIYLGAVNRI71YKLSSDLKVL81VTHQTGPDED91NPKCYPPRIV
101-150101QTCNEPLAST111NNVNKMLLID121YKENRLIACG131SLYQGICKLL141RLEDLFKLGE
151-200151PFHKKEHYLS161GVNESGSVFG171VIVSYSNFDD181KLFIATAVDG191KPEYFPTISS
201-250201RKLTKNSEAD211GMFAYVFHDE221FVASMIKIPS231DTFTVIPDFD241IYYVYGFSSG
251-300251NFVYFLTLQP261EMVSPPGSTT271KEQVYTSKLV281RLCKEDTAFN291SYVEVPIGCE
301-350301RNGVEYRLLQ311AAYLSKAGAV321LGRTLGVRPD331DDLLFTVFSK341GQKRKMKSLD
351-400351ESALCIFILK361QINDRIKDRL371QSCYRGEGTL381DLAWLKVKDI391PCSSALLTID
401-450401DNFCGLDMNA411PLGVSEMVRG421IPVFTEDRDR431MTSVIAYVYK441NHSLAFVGTK
451-500451SGKLKKIRVD461GPKGNALQYE471TVQVVDSGPV481LRDMAFSKDH491EQLYIMSERQ
501-550501LTRVPVESCG511QYRSCGECLG521SGDPHCGWCV531LHNTCTRKER541CERSREPRRF
551-600551ASEMKQCVRL561TVHPNNISVS571QYNVLLVLET581YNVPELSAGV591NCTFEDLSEM
601-650601DGLVIGNQIQ611CYSPAAKEVP621RIITENGDHH631VVQLQLKSKE641TGMTFASTSF
651-700651VFYNCSVHNS661CLSCVESPYR671CHWCKYRHVC681THDPNTCSFQ691EGRVKLPEDC
701-750701PQLLRVDKIL711VPVEVIKPIT721LKAKNLPQPQ731SGQRGYECIL741NIQGIEQRVP
751-800751ALRFNSSSVQ761CQNTSYSYEG771MEINNLPVEL781TVVWNGHFNI791DNPAQNKVYL
801-850801YKCGAMRESC811GLCLKADPDF821ECGWCQSPGQ831CTLRQHCPAH841ESRWLELSGA
851-900851NSKCTNPRIT861EIIPVTGPRE871GGTKVTIRGE881NLGLEFRDIA891SHVKVAGVEC
901-950901SPLVDGYIPA911EQIVCEMGEA921KPSQHAGFVE931ICVAVCRPEF941MARSSQLYYF
951-1000951MTLTLADLKP961NRGPMSGGTQ971VTITGTNLNA981GSNVVVMFGS991QPCLFHRRSP
1001-10501001SYIICNTTSS1011EEVLDMKVTV1021QVDRARIRQD1031LVFQYVEDPT1041IVRIEPEWSI
1051-11001051VSGNTPIAVW1061GTHLDLIQNP1071QIRAKHGGKE1081HINICEVLNA1091TEMTCQAPAL
1101-11501101ALGPDHQSDL1111TERPEEFGFI1121LDNVQSLLIL1131NKTNFTYYPN1141PVFEAFSPSG
1151-12001151ILELKPGTPI1161ILKGKNLIPP1171VAGGNVKLNY1181TVLVGEKPCT1191VTVSDVQLLC
1201-12501201ESPNLIGRHK1211VMARVGGMEY1221SPGMVYIAPD1231SPLSLPAIVS1241IAVAGGLLII
1251-13001251FIVAVLIAYK1261RKSRESDLTL1271KRLQMQMDNL1281ESRVALECKE1291AFAELQTDIH
1301-13501301ELTSDLDGAG1311IPFLDYRTYT1321MRVLFPGIED1331HPVLRDLEVP1341GYRQERVEKG
1351-14001351LKLFAQLINN1361KVFLLSFIRT1371LESQRSFSMR1381DRGNVASLIM1391TVLQSKLEYA
1401-14501401TDVLKQLLAD1411LIDKNLESKN1421HPKLLLRRTE1431SVAEKMLTNW1441FTFLLYKFLK
1451-15001451ECAGEPLFSL1461FCAIKQQMEK1471GPIDAITGEA1481RYSLSEDKLI1491RQQIEYKTLV
1501-15501501LSCVSPDNVN1511SPEVPVKILN1521CDTITQVKEK1531ILDAIFKNVP1541CSHRPKAADM
1551-16001551DLEWRQGSGA1561RMILQDEDIT1571TKIENDWKRL1581NTVAHYQVPD1591GSVVALVSKQ
1601-16501601VTAYNAVNNS1611TVSRTSASKY1621ENMIRYTGSP1631DSLRSRTPMI1641TPDLESGVKL
1651-17001651WHLVKNHEHG1661DQKEGDRGSK1671MVSEIYLTRL1681LATKGTLQKF1691VDDLFETIFS
1701-17501701TAHRGSALPL1711AIKYMFDFLD1721EQADKHGIHD1731PHVRHTWKSN1741CLPLRFWVNM
1751-18001751IKNPQFVFDI1761HKNSITDACL1771SVVAQTFMDS1781CSTSEHRLGK1791DSPSNKLLYA
1801-18501801KDIPSYKNWV1811ERYYSDIGKM1821PAISDQDMNA1831YLAEQSRMHM1841NEFNTMSALS
1851-18931851EIFSYVGKYS1861EEILGPLDHD1871DQCGKQKLAY1881KLEQVITLMS1891LDS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 10 | - | - | - |
Deep-Palm: 0.04
|
|
| 94 | - | - | - |
Deep-Palm: 0.20
|
|
| 103 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.14
|
|
| 129 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.90
|
|
| 137 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.92
|
|
| 283 | - | - | - |
Deep-Palm: 0.91
|
|
| 299 | - | - | - |
Deep-Palm: 0.83
|
|
| 355 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.88
|
|
| 373 | - | - | - |
Deep-Palm: 0.96
|
|
| 392 | - | - | - |
Deep-Palm: 0.93
|
|
| 404 | - | - | - |
Deep-Palm: 0.68
|
|
| 509 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.65
|
|
| 515 | - | - | - |
Deep-Palm: 0.09
|
|
| 518 | - | - | - |
Deep-Palm: 0.07
|
|
| 526 | - | - | - |
Deep-Palm: 0.09
|
|
| 529 | - | - | - |
Deep-Palm: 0.12
|
|
| 535 | - | - | - |
Deep-Palm: 0.13
|
|
| 541 | - | - | - |
Deep-Palm: 0.22
|
|
| 557 | - | - | - |
Deep-Palm: 0.78
|
|
| 592 | - | - | - |
Deep-Palm: 0.76
|
|
| 611 | - | - | - |
Deep-Palm: 0.89
|
|
| 655 | - | - | - |
Deep-Palm: 0.03
|
|
| 661 | - | - | - |
Deep-Palm: 0.01
|
|
| 664 | - | - | - |
Deep-Palm: 0.01
|
|
| 671 | - | - | - |
Deep-Palm: 0.02
|
|
| 674 | - | - | - |
Deep-Palm: 0.02
|
|
| 680 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.03
|
|
| 687 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.02
|
|
| 700 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.76
|
|
| 738 | TIG domain found in plexin |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.92
|
|
| 761 | - | - | - |
Deep-Palm: 0.56
|
|
| 803 | - | - | - |
Deep-Palm: 0.51
|
|
| 810 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.24
|
|
| 813 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.19
|
|
| 822 | SWISSPALM DBPTM CYSMODDB | Plexin repeat |
Forebrain
(28680068)
brain
(39008777)
| - |
Deep-Palm: 0.21
|
| 825 | - |
brain
(39008777)
| - |
Deep-Palm: 0.17
|
|
| 831 | - |
brain
(39008777)
| - |
Deep-Palm: 0.05
|
|
| 837 | - | - | - |
Deep-Palm: 0.17
|
|
| 854 | - | - | - |
Deep-Palm: 0.77
|
|
| 900 | - | - | - |
Deep-Palm: 0.87
|
|
| 915 | - | - | - |
Deep-Palm: 0.65
|
|
| 932 | - | - | - |
Deep-Palm: 0.68
|
|
| 936 | - | - | - |
Deep-Palm: 0.27
|
|
| 993 | - | - | - |
Deep-Palm: 0.19
|
|
| 1005 | - | - | - |
Deep-Palm: 0.37
|
|
| 1085 | - | - | - |
Deep-Palm: 0.53
|
|
| 1095 | - | - | - |
Deep-Palm: 0.38
|
|
| 1189 | - | - | - |
Deep-Palm: 0.82
|
|
| 1200 | - | - | - |
Deep-Palm: 0.90
|
|
| 1288 | - | - | - |
Deep-Palm: 0.69
|
|
| 1452 | - | - | - |
Deep-Palm: 0.49
|
|
| 1462 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.77
|
|
| 1503 | - | - | - |
Deep-Palm: 0.76
|
|
| 1521 | - | - | - |
Deep-Palm: 0.75
|
|
| 1541 | - | - | - |
Deep-Palm: 0.93
|
|
| 1741 | - | - | - |
Deep-Palm: 0.17
|
|
| 1769 | - | - | - |
Deep-Palm: 0.11
|
|
| 1781 | - | - | - |
Deep-Palm: 0.66
|
|
| 1873 | - | - | - |
Deep-Palm: 0.87
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.115
3/3 (100.0%)
2
Brain
Specificity: 0.077
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
21
Brain tissue (Mass)
Specificity: 0.808
21/56 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.