Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q80X95 | Rraga | Ras-related GTP-binding protein A (Rag … | Mus musculus (Mouse) | 313 aa |
Protein Details: Q80X95 (Rraga)
Protein Information
| Accession | Q80X95 |
|---|---|
| Protein Names | Ras-related GTP-binding protein A (Rag A) (RagA) (EC 3.6.5.-) |
| Gene Symbol | Rraga |
| Organism | Mus musculus (Mouse) |
| Length | 313 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 34200797 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPNTAMKKKV11LLMGKSGSGK21TSMRSIIFAN31YIARDTRRLG41ATIDVEHSHV
51-10051RFLGNLVLNL61WDCGGQDTFM71ENYFTSQRDN81IFRNVEVLIY91VFDVESRELE
101-150101KDMHYYQSCL111EAILQNSPDA121KIFCLVHKMD131LVQEDQRDLI141FKEREEDLRR
151-200151LSRPLECACF161RTSIWDETLY171KAWSSIVYQL181IPNVQQLEMN191LRNFAQIIEA
201-250201DEVLLFERAT211FLVISHYQCK221EQRDVHRFEK231ISNIIKQFKL241SCSKLAASFQ
251-300251SMEVRNSNFA261AFIDIFTSNT271YVMVVMSDPS281IPSAATLINI291RNARKHFEKL
301-313301ERVDGPKHSL311LMR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 63 | - | - | - |
Deep-Palm: 0.57
|
|
| 109 | SWISSPALM DBPTM CYSMODDB | Gtr1/RagA G protein conserved region |
Forebrain
(28680068)
| - |
Deep-Palm: 0.46
|
| 124 | - | - | - |
Deep-Palm: 0.92
|
|
| 157 | Gtr1/RagA G protein conserved region |
MLE
(39008777)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
|
| 159 | Gtr1/RagA G protein conserved region |
MLE
(39008777)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
|
| 219 | - | - | - |
Deep-Palm: 0.69
|
|
| 242 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.87
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.