Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q80XN0 | Bdh1 | D-beta-hydroxybutyrate dehydrogenase, mitochondrial (EC 1.1.1.30) … | Mus musculus (Mouse) | 343 aa |
Protein Details: Q80XN0 (Bdh1)
Protein Information
| Accession | Q80XN0 |
|---|---|
| Protein Names | D-beta-hydroxybutyrate dehydrogenase, mitochondrial (EC 1.1.1.30) (3-hydroxybutyrate dehydrogenase) (BDH) |
| Gene Symbol | Bdh1 |
| Organism | Mus musculus (Mouse) |
| Length | 343 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLAARLSRPL11SQLPGKALSV21RDRENGTRHT31LLFYPASFSP41DTRRTYASQA
51-10051DAASGKAILI61TGCDSGFGFS71LAKHLHSKGF81LVFAGCLMKD91KGDAGVKELD
101-150101SLKSDRLRTI111QLNVCNSEEV121EKAVETIRSG131LKDPEKGMWG141LVNNAGISTF
151-200151GEVEFTSMET161YKEVAEVNLW171GTVRTTKSFL181PLLRRAKGRV191VNISSMLGRM
201-250201ANPARSPYCI211TKFGIEAFSD221CLRYEMHPLG231VKVSVVEPGN241FIAATSLYSP
251-300251ERIQAIAKKM261WDDLPEVVRK271DYGRKYFDEK281IAKMETYCNS291GSTDTSSVIN
301-343301AVTHALTAAT311PYTRYHPMDY321YWWLRMQIMT331HFPGAISDKI341YIH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 63 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.96
|
| 86 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
|
Brain
(35358180)
|
GPS-Palm: 0.90
Deep-Palm: 0.98
|
| 115 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
|
Brain
(35358180)
|
Deep-Palm: 0.97
|
| 209 | SWISSPALM DBPTM CYSMODDB | short chain dehydrogenase |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.93
|
| 221 | SWISSPALM DBPTM CYSMODDB | short chain dehydrogenase |
Liver
(28526873)
Brain
(31311849)
liver
(26165157)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.93
|
| 288 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Forebrain
(28680068)
|
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.39
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
6
Liver
Specificity: 0.167
6/6 (100.0%)
5
Brain
Specificity: 0.139
5/5 (100.0%)
1
Testis
Specificity: 0.028
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
24
Brain tissue (Mass)
Specificity: 0.667
24/56 (42.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.