Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q80XR2 | Atp2c1 | Calcium-transporting ATPase type 2C member … | Mus musculus (Mouse) | 918 aa |
Protein Details: Q80XR2 (Atp2c1)
Protein Information
| Accession | Q80XR2 |
|---|---|
| Protein Names | Calcium-transporting ATPase type 2C member 1 (ATPase 2C1) (EC 7.2.2.10) (ATP-dependent Ca(2+) pump PMR1) (Ca(2+)/Mn(2+)-ATPase 2C1) (Secretory pathway Ca(2+)-transporting ATPase type 1) (SPCA1) |
| Gene Symbol | Atp2c1 |
| Organism | Mus musculus (Mouse) |
| Length | 918 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35358180 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKVARFQKIP11NVENETMIPV21LTSKRASELA31VSEVAGLLQA41DLQNGLNKSE
51-10051VSHRRAFHGW61NEFDISEDEP71LWKKYISQFK81NPLIMLLLAS91AVISILMRQF
101-150101DDAVSITVAI111VIVVTVAFVQ121EYRSEKSLEE131LSKLVPPECH141CVREGKLEHT
151-200151LARDLVPGDT161VCLSVGDRVP171ADLRLFEAVD181LSVDESSLTG191ETAPCSKVTA
201-250201PQPAANGDLA211SRSNIAFMGT221LVRCGKAKGI231VIGTGENSEF241GEVFKMMQAE
251-300251EAPKTPLQKS261MDLLGKQLSF271YSFGIIGIIM281LVGWLLGKDI291LEMFTISVSL
301-350301AVAAIPEGLP311IVVTVTLALG321VMRMVKKRAI331VKKLPIVETL341GCCNVICSDK
351-400351TGTLTKNEMT361VTHILTSDGL371HAEVTGVGYN381QFGEVIVDGD391VVHGFYNPAV
401-450401SRIVEAGCVC411NDAVIRNNTL421MGKPTEGALI431ALAMKMGLDG441LQQDYIRKAE
451-500451YPFSSEQKWM461AVKCVHRTQQ471DRPEICFMKG481AYEQVIKYCT491TYNSKGQTLA
501-550501LTQQQRDLYQ511QEKARMGSAG521LRVLALASGP531ELGQLTFLGL541VGIIDPPRTG
551-600551VKEAVTTLIA561SGVSIKMITG571DSQETAIAIA581SRLGLYSKTS591QSVSGEEVDT
601-650601MEVQHLSQIV611PKVAVFYRAS621PRHKMKIIKS631LQKNGAVVAM641TGDGVNDAVA
651-700651LKAADIGVAM661GQTGTDVCKE671AADMILVDDD681FQTIMSAIEE691GKGIYNNIKN
701-750701FVRFQLSTSI711AALTLISLAT721LMNFPNPLNA731MQILWINIIM741DGPPAQSLGV
751-800751EPVDKDVIRK761PPRNWKDSIL771TKNLILKILV781SSIIIVCGTL791FVFWRELRDN
801-850801VITPRDTTMT811FTCFVFFDMF821NALSSRSQTK831SVFEIGLCSN841KMFCYAVLGS
851-900851IMGQLLVIYF861PPLQKVFQTE871SLSILDLLFL881LGLTSSVCIV891SEIIKKVERS
901-918901REKVQKNAGS911ASSSFLEV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 139 | - | - | - |
Deep-Palm: 0.98
|
|
| 141 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 162 | - | - | - |
Deep-Palm: 0.98
|
|
| 195 | - | - | - |
Deep-Palm: 0.94
|
|
| 224 | - | - | - |
Deep-Palm: 0.95
|
|
| 342 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 343 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.98
|
|
| 347 | - | - | - |
Deep-Palm: 0.97
|
|
| 408 | - | - | - |
Deep-Palm: 0.40
|
|
| 410 | - | - | - |
Deep-Palm: 0.52
|
|
| 464 | - | - | - |
Deep-Palm: 0.12
|
|
| 476 | - | - | - |
Deep-Palm: 0.08
|
|
| 489 | - | - | - |
Deep-Palm: 0.81
|
|
| 668 | - | - | - |
Deep-Palm: 0.90
|
|
| 787 | - | - | - |
Deep-Palm: 0.87
|
|
| 813 | - | - | - |
Deep-Palm: 0.14
|
|
| 838 | SWISSPALM DBPTM CYSMODDB | Cation transporting ATPase C-terminus |
Forebrain
(28680068)
| - |
Deep-Palm: 0.85
|
| 844 | - | - | - |
Deep-Palm: 0.54
|
|
| 888 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
1
Brain
Specificity: 0.500
1/1 (100.0%)
1
Liver
Specificity: 0.500
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.