Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q80YN3 | Bcas1 | Breast carcinoma-amplified sequence 1 homolog … | Mus musculus (Mouse) | 633 aa |
Protein Details: Q80YN3 (Bcas1)
Protein Information
| Accession | Q80YN3 |
|---|---|
| Protein Names | Breast carcinoma-amplified sequence 1 homolog (Novel amplified in breast cancer 1 homolog) |
| Gene Symbol | Bcas1 |
| Organism | Mus musculus (Mouse) |
| Length | 633 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31311849 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGNQMSVPLR11PGDQEHDPGA21DTCKVTSDNE31CVQNGNPVVL41STRVIQHYEE
51-10051VDLGISSSKD61NVATSSPKTM71EAQAVGDASG81KNLGKEAKTK91APAARSHFFL
101-150101TLSRPVPGRP111GDQGTDSSAA121SGRFDVSPSA131APENKDPSEH141GALPVAAAPG
151-200151QAPDKTPGCP161EAKQQTLPAT171GPLAPSPPES181QAEAPAQDKD191FGFLNRFFKL
201-250201DKGRESAPVN211SQPKEAKGSE221DPEQATEAPA231VPGNPHGVSA241GEDIVDSEQR
251-300251GQDVDTLSYS261VPGDPEVPGT271TKEDPQVVDT281TENSSSIMSF291FKTLVSPNKT
301-350301ETKKDPEDTK311ATKADSVCDG321HAAGQKMSET331QAKSKKKRLD341SPRLGLSFRK
351-400351LFRHKDTENS361PTTSANLKSD371KANFTPQETR381GKTKATKSCS391PPPPPPEPTS
401-450401EGRDSGKEKA411GPTSLPLGKL421FWKKSVKEDT431LSTGAEENAV441CESPVETVRL
451-500451EEVESSLQTV461DLSEETQPEP471TDVKVKEESK481PRKTPLMAFL491RQMSVRSSEG
501-550501IPRSEESNVK511DSSCQTSNSV521EKTPSPPEPE531PAGTAQKNKE541TSSSKDKKSV
551-600551DKKSATENSK561QKNGKQEVRE571PAPCVQPPTV581EANAMQTGDK591TPKKSEKRRQ
601-633601SLGGFLKGLG611PKRMSDAQVQ621TDPVSIGPVG631KSK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 23 | - | - | - |
Deep-Palm: 0.08
|
|
| 31 | - | - | - |
Deep-Palm: 0.25
|
|
| 159 | - | - | - |
Deep-Palm: 0.94
|
|
| 318 | - |
Brain
(31311849)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.73
|
|
| 389 | - |
Brain
(31311849)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.89
|
|
| 441 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.93
|
|
| 514 | - |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.70
|
|
| 574 | - |
Brain
(34200797)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.69
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Brain
Specificity: 0.108
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
33
Brain tissue (Mass)
Specificity: 0.892
33/56 (58.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.