Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q80ZW2 | Them6 | Protein THEM6 | Mus musculus (Mouse) | 207 aa |
Protein Details: Q80ZW2 (Them6)
Protein Information
| Accession | Q80ZW2 |
|---|---|
| Protein Names | Protein THEM6 |
| Gene Symbol | Them6 |
| Organism | Mus musculus (Mouse) |
| Length | 207 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLELLVASLS11LALAFFALLD21GWYLVRVPCA31VLRARLLQPR41VRDLLAEQRY
51-10051AGRVLPSDLD61LLLHMNNARY71LREADVARAA81HLTRCGVLGA91LRDLNAHTVL
101-150101AASCARYRRS111LRLFEPFEVH121TRLQGWDDRA131FYLEARFVSL141RDGFVCALLR
151-200151FRQHVLGTSP161DRVVQHLCKR171RVEPPELPED181LKHWISYNET191SSQLLRAESG
201-207201LSDRKDQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 29 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.92
Deep-Palm: 0.98
|
| 85 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.97
|
|
| 104 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.91
|
|
| 146 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.84
Deep-Palm: 0.96
|
|
| 168 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.75
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.053
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
18
Brain tissue (Mass)
Specificity: 0.947
18/56 (32.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.