Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q86XA6 | B4GALT1 | B4GALT1 protein (Beta-1,4-galactosyltransferase 1) | Homo sapiens (Human) | 225 aa |
Protein Details: Q86XA6 (B4GALT1)
Protein Information
| Accession | Q86XA6 |
|---|---|
| Protein Names | B4GALT1 protein (Beta-1,4-galactosyltransferase 1) |
| Gene Symbol | B4GALT1 |
| Organism | Homo sapiens (Human) |
| Length | 225 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29575903 31251020 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MRLREPLLSG11SAAMPGASLQ21RACRLLVAVC31ALHLGVTLVY41YLAGRDLSRL
51-10051PQLVGVSTPL61QGGSNSAAAI71GQSSGELRTG81GARPPPPLGA91SSQPRPGGDS
101-150101SPVVDSGPGP111ASNLTSVPVP121HTTALSLPAC131PEESPLLVGP141MLIEFNMPVD
151-200151LELVAKQNPN161VKMGGRYAPR171DCVSPHKVAI181IIPFRNRQEH191LKYWLYYLHP
201-225201VLQRQQLDYG211IYVINQYEKI221RRLLW
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 23 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.98
|
| 30 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.98
|
|
| 130 | - | - | - |
Deep-Palm: 0.97
|
|
| 172 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.30
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
LNCaP
Specificity: 0.600
3/3 (100.0%)
2
HeLa cell
Specificity: 0.400
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 166 | R → C | 0.002294 | SNP | Missense Mutation | OV |
| 262 | C → W | 0.001887 | SNP | Missense Mutation | UCEC |
| 339 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |