Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BFT9 | Svop | Synaptic vesicle 2-related protein (SV2-related … | Mus musculus (Mouse) | 548 aa |
Protein Details: Q8BFT9 (Svop)
Protein Information
| Accession | Q8BFT9 |
|---|---|
| Protein Names | Synaptic vesicle 2-related protein (SV2-related protein) |
| Gene Symbol | Svop |
| Organism | Mus musculus (Mouse) |
| Length | 548 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEEDLFQLRQ11LPVVKFRRTG21ESARSEDDAA31SGEHDIQIEG41VRVGLEAIEL
51-10051DDGAAVPKEF61ANPTDDTFMV71EDAVEAIGFG81RFQWKLSVLT91GLAWMADAME
101-150101MMILSILAPQ111LHCEWRLPSW121QVALLTSVVF131IGMMSSSTLW141GNISDQYGRK
151-200151TGLKISVLWT161LYYGILSAFA171PVYSWILVLR181GLVGFGIGGV191PQSVTLYAEF
201-250201LPMKARAKCI211LLIEVFWAIG221TVFEVLLAVF231VMPSLGWRWL241LLLSAAPLLL
251-300251FAVLCFWLPE261SARYDVLSGN271QEKAIATLKR281IATENGAPMP291LGKLIISRQE
301-350301DRGKMRDLFT311PHFRWTTLLL321WFIWFSNAFS331YYGLVLLTTE341LFQAGDVCSI
351-400351SSRKKAVEAK361CSLACEYLSK371EDYMDLLWTT381LSEFPGVLVT391LWVIDRLGRK
401-450401KTMALCFIIF411SLCSLLLFIC421IGRNVLTLLL431FIARAFISGG441FQAAYVYTPE
451-500451VYPTATRALG461LGTCSGMARV471GALITPFIAQ481VMLESSVYLT491LAVYSGCCLL
501-548501AGVASCFLPI511ETKGRALQES521SHREWGQEMV531GRGTNSAGVP541RSDSGSQE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 113 | - | - | - |
Deep-Palm: 0.59
|
|
| 209 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.53
|
|
| 255 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.98
|
|
| 348 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.97
|
|
| 361 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.90
|
|
| 365 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.95
|
|
| 406 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.93
|
|
| 413 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.78
|
|
| 420 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
|
| 464 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.95
|
| 497 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.94
|
|
| 498 | - | - | - |
Deep-Palm: 0.96
|
|
| 506 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.333
2/2 (100.0%)
1
Brain
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.500
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.