Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BFY6 | Pef1 | Peflin (PEF protein with a … | Mus musculus (Mouse) | 275 aa |
Protein Details: Q8BFY6 (Pef1)
Protein Information
| Accession | Q8BFY6 |
|---|---|
| Protein Names | Peflin (PEF protein with a long N-terminal hydrophobic domain) (Penta-EF hand domain-containing protein 1) |
| Gene Symbol | Pef1 |
| Organism | Mus musculus (Mouse) |
| Length | 275 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASYPNGQSC11PGAAGQVPGV21PPGGYYPGPP31HGGGQYGSGL41PPGGGYGAPA
51-10051PGGPYGYPSA61GGVPSGTPSG71PYGGIPPGGP81YGQLPPGGPY91GTQPGHYGQG
101-150101GVPPNVDPEA111YSWFQSVDAD121HSGYISLKEL131KQALVNSNWS141SFNDETCLMM
151-200151INMFDKTKSG161RIDVAGFSAL171WKFLQQWRNL181FQQYDRDRSG191SISSTELQQA
201-250201LSQMGYNLSP211QFTQLLVSRY221CARSAIPAMQ231LDCFIKVCTQ241LQVLTEAFRE
251-275251KDTAVQGNIR261LSFEDFVTMT271ASRML
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 10 | - | - | - |
Deep-Palm: 0.02
|
|
| 147 | - | - | - |
Deep-Palm: 0.10
|
|
| 221 | - | - | - |
Deep-Palm: 0.77
|
|
| 233 | - | - | - |
Deep-Palm: 0.75
|
|
| 238 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.88
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
3
Liver
Specificity: 0.429
3/3 (100.0%)
1
Testis
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.429
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.