Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BFY9 | Tnpo1 | Transportin-1 (Importin beta-2) (Karyopherin beta-2) | Mus musculus (Mouse) | 898 aa |
Protein Details: Q8BFY9 (Tnpo1)
Protein Information
| Accession | Q8BFY9 |
|---|---|
| Protein Names | Transportin-1 (Importin beta-2) (Karyopherin beta-2) |
| Gene Symbol | Tnpo1 |
| Organism | Mus musculus (Mouse) |
| Length | 898 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVWDRQTKME11YEWKPDEQGL21QQILQLLKES31QSPDTTIQRT41VQQKLEQLNQ
51-10051YPDFNNYLIF61VLTKLKSEDE71PTRSLSGLIL81KNNVKAHFQN91FPNGVTDFIK
101-150101SECLNNIGDS111SPLIRATVGI121LITTIASKGE131LQNWPDLLPK141LCSLLDSEDY
151-200151NTCEGAFGAL161QKICEDSAEI171LDSDVLDRPL181NIMIPKFLQF191FKHSSPKIRS
201-250201HAVACVNQFI211ISRTQALMLH221IDSFIENLFA231LAGDEEAEVR241KNVCRALVML
251-300251LEVRMDRLLP261HMHNIVEYML271QRTQDQDENV281ALEACEFWLT291LAEQPICKDV
301-350301LVRHLPKLIP311VLVNGMKYSD321IDIILLKGDV331EEDETIPDSE341QDIRPRFHRS
351-400351RTVAQQHEED361GIEEEDDDDD371EIDDDDTISD381WNLRKCSAAA391LDVLANVYRD
401-450401ELLPHILPLL411KELLFHHEWV421VKESGILVLG431AIAEGCMQGM441IPYLPELIPH
451-500451LIQCLSDKKA461LVRSITCWTL471SRYAHWVVSQ481PPDTYLKPLM491TELLKRILDS
501-550501NKRVQEAACS511AFATLEEEAC521TELVPYLAYI531LDTLVFAFSK541YQHKNLLILY
551-600551DAIGTLADSV561GHHLNKPEYI571QMLMPPLIQK581WNMLKDEDKD591LFPLLECLSS
601-650601VATALQSGFL611PYCEPVYQRC621VNLVQKTLAQ631AMLNNAQPEQ641YEAPDKDFMI
651-700651VALDLLSGLA661EGLGGNIEQL671VARSNILTLM681YQCMQDKMPE691VRQSSFALLG
701-750701DLTKACFQHV711KPCIADFMPI721LGTNLNPEFI731SVCNNATWAI741GEISIQMGIE
751-800751MQPYIPMVLH761QLVEIINRPN771TPKTLLENTA781ITIGRLGYVC791PQEVAPMLQQ
801-850801FIRPWCTSLR811NIRDNEEKDS821AFRGICTMIS831VNPSGVIQDF841IFFCDAVASW
851-898851INPKDDLRDM861FCKILHGFKN871QVGDENWRRF881SDQFPLPLKE891RLAAFYGV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 103 | - | - | - |
Deep-Palm: 0.56
|
|
| 142 | - | - | - |
Deep-Palm: 0.81
|
|
| 153 | - | - | - |
Deep-Palm: 0.96
|
|
| 164 | - | - | - |
Deep-Palm: 0.79
|
|
| 205 | - | - | - |
Deep-Palm: 0.46
|
|
| 244 | - | - | - |
Deep-Palm: 0.98
|
|
| 285 | - | - | - |
Deep-Palm: 0.30
|
|
| 297 | - | - | - |
Deep-Palm: 0.83
|
|
| 386 | - | - | - |
Deep-Palm: 0.86
|
|
| 436 | - | - | - |
Deep-Palm: 0.89
|
|
| 454 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.90
|
|
| 467 | - | - | - |
Deep-Palm: 0.69
|
|
| 509 | - | - | - |
Deep-Palm: 0.93
|
|
| 520 | - | - | - |
Deep-Palm: 0.86
|
|
| 597 | - | - | - |
Deep-Palm: 0.97
|
|
| 613 | - | - | - |
Deep-Palm: 0.88
|
|
| 620 | - | - | - |
Deep-Palm: 0.72
|
|
| 683 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.76
|
| 706 | - | - | - |
Deep-Palm: 0.88
|
|
| 713 | - | - | - |
Deep-Palm: 0.74
|
|
| 733 | - | - | - |
Deep-Palm: 0.15
|
|
| 790 | - | - | - |
Deep-Palm: 0.82
|
|
| 806 | - | - | - |
Deep-Palm: 0.73
|
|
| 826 | - | - | - |
Deep-Palm: 0.54
|
|
| 844 | - | - | - |
Deep-Palm: 0.19
|
|
| 862 | - | - | - |
Deep-Palm: 0.49
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.667
4/4 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.