Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BG39 | Sv2b | Synaptic vesicle glycoprotein 2B (Synaptic … | Mus musculus (Mouse) | 683 aa |
Protein Details: Q8BG39 (Sv2b)
Protein Information
| Accession | Q8BG39 |
|---|---|
| Protein Names | Synaptic vesicle glycoprotein 2B (Synaptic vesicle protein 2B) |
| Gene Symbol | Sv2b |
| Organism | Mus musculus (Mouse) |
| Length | 683 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDDYRYRDNY11EGYAPSDGYY21RSNEQNQEED31AQSDVTEGHD41EEDEIYEGEY
51-10051QGIPHPDDVK61SKQTKMAPSR71ADGLGGQADL81MAERMEDEEE91LAHQYETIID
101-150101ECGHGRFQWT111LFFVLGLALM121ADGVEIFVVS131FALPSAEKDM141CLSSSKKGML
151-200151GLIVYLGMMA161GAFILGGLAD171KLGRKKVLSM181SLAINASFAS191LSSFVQGYGA
201-250201FLFCRLISGI211GIGGSLPIVF221AYFSEFLSRE231KRGEHLSWLG241IFWMTGGIYA
251-300251SAMAWSIIPH261YGWGFSMGTN271YHFHSWRVFV281IVCALPATVS291MVALKFMPES
301-350301PRFLLEMGKH311DEAWMILKQV321HDTNMRAKGT331PEKVFTVSHI341KTPKQMDEFI
351-400351EIQSSTGTWY361QRWLVRFMTI371FKQVWDNALY381CVMGPYRMNT391LILAVVWFTM
401-450401ALSYYGLTVW411FPDMIRYFQD421EEYKSKMKVF431FGEHVHGATI441NFTMENQIHQ
451-500451HGKLVNDKFI461KMYFKHVLFE471DTFFDKCYFE481DVTSTDTYFK491NCTIESTTFY
501-550501NTDLYKHKFI511NCRFINSTFL521EQKEGCHMDF531EEDNDFLIYL541VSFLGSLSVL
551-600551PGNIISALLM561DRIGRLKMIG571GSMLISAVCC581FFLFFGNSES591AMIGWQCLFC
601-650601GTSIAAWNAL611DVITVELYPT621NQRATAFGIL631NGLCKFGAIL641GNTIFASFVG
651-683651ITKVVPILLA661AASLVGGGLI671ALRLPETREQ681VLM
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 102 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.30
|
| 141 | - | - | - |
Deep-Palm: 0.95
|
|
| 204 | - | - | - |
Deep-Palm: 0.91
|
|
| 283 | - | - | - |
Deep-Palm: 0.12
|
|
| 381 | - | - | - |
Deep-Palm: 0.19
|
|
| 477 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.04
|
|
| 492 | - | - | - |
Deep-Palm: 0.03
|
|
| 512 | - | - | - |
Deep-Palm: 0.06
|
|
| 526 | - | - | - |
Deep-Palm: 0.05
|
|
| 579 | - | - | - |
Deep-Palm: 0.56
|
|
| 580 | - | - | - |
Deep-Palm: 0.13
|
|
| 597 | - | - | - |
Deep-Palm: 0.08
|
|
| 600 | - | - | - |
Deep-Palm: 0.10
|
|
| 634 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.83
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain
Specificity: 0.087
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
21
Brain tissue (Mass)
Specificity: 0.913
21/56 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.