Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BGD9 | Eif4b | Eukaryotic translation initiation factor 4B … | Mus musculus (Mouse) | 611 aa |
Protein Details: Q8BGD9 (Eif4b)
Protein Information
| Accession | Q8BGD9 |
|---|---|
| Protein Names | Eukaryotic translation initiation factor 4B (eIF-4B) |
| Gene Symbol | Eif4b |
| Organism | Mus musculus (Mouse) |
| Length | 611 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAASAKKKNK11KGKTISLTDF21LAEDGGTGGG31STYVPKPVSW41ADETDDLEGD
51-10051VSTTWHSNDD61DVYRAPPIDR71SILPTAPRAA81REPNIDRSRL91PKSPPYTAFL
101-150101GNLPYDVTED111SIKDFFRGLN121ISAVRLPREP131SNPDRLKGFG141YAEFEDLDSL
151-200151LSALSLNEES161LGNRRIRVDV171ADQAQDKDRD181DRSFGRDRNR191DSDKTDTDWR
201-250201ARPTTDSFDD211YPPRRGDDSF221GDKYRDRYDS231DRYRDGYRDG241YRDGPRRDMD
251-300251RYGGRDRYDD261RGSRDYDRGY271DSRIGSGRRA281FGSGYRRDDD291YRGGGDRYED
301-350301RYDRRDDRSW311SSRDDYSRDD321YRRDDRGPPQ331RPRLNLKPRS341APKEDDASAS
351-400351TSQSSRAASI361FGGAKPVDTA371AREREVEERL381QKEQEKLQRQ391LDEPKLDRRP
401-450401RERHPSWRSE411ETQERERSRT421GSESSQTGAS431ATSGRNTRRR441ESEKSLENET
451-500451LNKEEDCHSP461TSKPPKPDQP471LKVMPAPPPK481ENAWVKRSSN491PPARSQSSDT
501-550501EQPSPTSGGG511KVAAVQPPEE521GPSRKDGNKV531DVVGATQGQA541GSCSRGPGDG
551-600551GSRDHWKDLD561RKDGKKDQDS571RSAPEPKKPE581ENPASKFSSA591SKYAALSVDG
601-611601EDEDEGDDCT611E
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 457 | - | - | - |
Deep-Palm: 0.70
|
|
| 543 | SWISSPALM DBPTM CYSMODDB | - | - |
Brain
(35358180)
|
Deep-Palm: 0.74
|
| 609 | - | - | - |
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.231
3/3 (100.0%)
2
Brain
Specificity: 0.154
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
8
Brain tissue (Mass)
Specificity: 0.615
8/56 (14.3%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.