Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BGH2 | Samm50 | Sorting and assembly machinery component … | Mus musculus (Mouse) | 469 aa |
Protein Details: Q8BGH2 (Samm50)
Protein Information
| Accession | Q8BGH2 |
|---|---|
| Protein Names | Sorting and assembly machinery component 50 homolog |
| Gene Symbol | Samm50 |
| Organism | Mus musculus (Mouse) |
| Length | 469 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 31772009 34200797 35358180 35477839 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.543
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.543
19/19 (100.0%)
11
Brain tissue
Specificity: 0.314
11/12 (91.7%)
3
Neural Stem Cells
Specificity: 0.086
3/3 (100.0%)
2
Testis
Specificity: 0.057
2/2 (100.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MGTVHARSLE11PLPSSGTDFG21ALGEEAEFVE31VEPEAKQEIL41ENKDVVVQHV
51-10051HFDGLGRTKD61DIIICEIGEV71FKAKNLIEVM81RRSHEAREKL91LRLGIFRQVD
101-150101VLIDTCHGED111ALPNGLDVTF121EVTELRRLTG131SYNTMVGNNE141GSMVLGLKLP
151-200151NLLGRAEKVT161FQFSYGTKET171SYGLSFFKPQ181PGNFERNFSV191NLYKVTGQFP
201-250201WSSLRETDRG211VSAEYSFPLW221KTSHTVKWEG231VWRELGCLSR241TASFAVRKES
251-300251GHSLKSSLSH261AMVIDSRNSS271ILPRRGALFK281VNQELAGYTG291GDVSFIKEDF
301-350301ELQLNKPLAL311DSVFSTSLWG321GMLVPIGDKP331SSIADRFYLG341GPTSVRGFSM
351-400351HSIGPQSEGD361YLGGEAYWAG371GLHLYTPLPF381RPGQGGFGEL391FRTHFFLNAG
401-450401NLCNLNYGEG411PKAHIRKLAE421CIRWSYGAGV431VLRLGNIARL441ELNYCIPMGV
451-469451QGGDRICDGV461QFGAGIRFL
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 65 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | - | 31311849, 28526873 |
| 237 | Experimental | - | 31311849 |
| 403 | Experimental | - | 31311849 |
| 445 | Experimental CYSMODDB SWISSPALM DBPTM | Omp85 superfamily domain | 28526873 |
| 457 | Experimental CYSMODDB SWISSPALM DBPTM | - | 28526873 |