Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BH24 | Tm9sf4 | Transmembrane 9 superfamily member 4 | Mus musculus (Mouse) | 643 aa |
Protein Details: Q8BH24 (Tm9sf4)
Protein Information
| Accession | Q8BH24 |
|---|---|
| Protein Names | Transmembrane 9 superfamily member 4 |
| Gene Symbol | Tm9sf4 |
| Organism | Mus musculus (Mouse) |
| Length | 643 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAAMIWWPR11FLLLLCLTCK21GSTFYVPGVA31PINFHQNDPV41EIKAVKLTSS
51-10051RTQLPYEYYS61LPFCQPIKIT71YKAENLGEVL81RGDRIVNTPF91QVLMNSEKKC
101-150101EVLCNQSNKP111ITLTVEQSRL121VAERITEEYY131VHLIADNLPV141ATRLELYSSN
151-200151RDSDDKKKEK161DVQFEHGYRL171GFTDVNKIYL181HNHLSFILYY191HREDMEEDQE
201-250201HTYRVVRFEV211IPQSIRLEDL221KTGEKSSCTL231PEGANSLPQE241IDPTKENQLY
251-300251FTYSVHWEES261DIKWASRWDT271YLTMSDVQIH281WFSIINSVVV291VFFLSGILSM
301-350301IIIRTLRKDI311ANYNKEDDIE321DTMEESGWKL331VHGDVFRPPQ341YPMILSSLLG
351-400351SGIQLFCMIL361IVIFVAMLGM371LSPSSRGALM381TTACFLFMFM391GVFGGFSAGR
401-450401LYRTLKGHRW411KKGAFCTATL421YPGVVFGICF431VLNCFIWGKH441SSGAVPFPTM
451-500451VALLCMWFGI461SLPLVYLGYY471FGFRKQPYDN481PVRTNQIPRQ491IPEQRWYMNR
501-550501FVGILMAGIL511PFGAMFIELF521FIFSAIWENQ531FYYLFGFLFL541VFIILVVSCS
551-600551QISIVMVYFQ561LCAEDYRWWW571RNFLVSGGSA581FYVLVYAIFY591FVNKLDIVEF
601-643601IPSLLYFGYT611TLMVLSFWLL621TGTIGFYAAY631MFVRKIYAAV641KID
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.86
|
|
| 19 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.78
|
|
| 64 | SWISSPALM DBPTM CYSMODDB | Endomembrane protein 70 |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.81
|
| 100 | - | - | - |
Deep-Palm: 0.26
|
|
| 104 | - | - | - |
Deep-Palm: 0.49
|
|
| 228 | - | - | - |
Deep-Palm: 0.98
|
|
| 357 | - | - | - |
Deep-Palm: 0.63
|
|
| 384 | - | - | - |
Deep-Palm: 0.54
|
|
| 416 | - | - | - |
Deep-Palm: 0.78
|
|
| 429 | - | - | - |
Deep-Palm: 0.21
|
|
| 434 | - | - | - |
Deep-Palm: 0.10
|
|
| 455 | - | - | - |
Deep-Palm: 0.62
|
|
| 549 | - | - | - |
Deep-Palm: 0.22
|
|
| 562 | - | - | - |
Deep-Palm: 0.07
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
Liver
Specificity: 0.364
4/4 (100.0%)
2
Brain
Specificity: 0.182
2/2 (100.0%)
2
Testis
Specificity: 0.182
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.273
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.