Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BH66 | Atl1 | Atlastin-1 (EC 3.6.5.-) (Spastic paraplegia … | Mus musculus (Mouse) | 558 aa |
Protein Details: Q8BH66 (Atl1)
Protein Information
| Accession | Q8BH66 |
|---|---|
| Protein Names | Atlastin-1 (EC 3.6.5.-) (Spastic paraplegia 3A homolog) |
| Gene Symbol | Atl1 |
| Organism | Mus musculus (Mouse) |
| Length | 558 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29733200 35358180 35477839 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAKSRRDRNS11WGGFSEKSSD21WSSEEEEPVR31KAGPVQVLIV41KDDHSFELDE
51-10051AALNRILLSQ61AVRDKEVVAV71SVAGAFRKGK81SFLMDFMLRY91MYNQESVDWV
101-150101GDYNEPLTGF111SWRGGSERET121TGIQIWSEVF131LINKLDGKKV141AVLLMDTQGT
151-200151FDSQSTLRDS161ATVFALSTMI171SSIQVYNLSQ181NVQEDDLQHL191QLFTEYGRLA
201-250201MEETFLKPFQ211SLIFLVRDWS221FPYEFSYGAD231GGAKFLEKRL241KVSGNQHEEL
251-300251QNVRKHIHSC261FTNISCFLLP271HPGLKVATNP281NFDGKLKEID291DEFIKNLKIL
301-350301IPWLLSPERL311DIKEINGNKI321TCRGLLEYFK331AYIKIYQGEE341LPHPKSMLQA
351-400351TAEANNLAAV361ATAKDTYNKK371MEEVCGGDKP381FLAPNDLQSK391HLQLKEESVK
401-450401LFRGVKKMGG411EEFSRRYLQQ421LESEIDELYI431QYIKHNDSKN441IFHAARTPAT
451-500451LFVVIFITYV461IAGVTGFIGL471DIIASLCNMI481MGLTLITLCT491WAYIRYSGEY
501-550501RELGAVIDQV511AAALWDQGST521NEALYKLYSA531AATHRHLCHQ541AFPAPKSEPT
551-558551QQPEKKKI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 260 | - | - | - |
Deep-Palm: 0.17
|
|
| 266 | - | - | - |
Deep-Palm: 0.18
|
|
| 322 | - | - | - |
Deep-Palm: 0.87
|
|
| 375 | - | - | - |
Deep-Palm: 0.75
|
|
| 477 | - | - | - |
Deep-Palm: 0.70
|
|
| 489 | - | - | - |
Deep-Palm: 0.77
|
|
| 538 | - | - | - |
Deep-Palm: 0.72
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Brain
Specificity: 0.600
3/3 (100.0%)
2
Testis
Specificity: 0.400
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.