Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BHJ6 | Serinc5 | Serine incorporator 5 (Axotomy-induced glycoprotein … | Mus musculus (Mouse) | 461 aa |
Protein Details: Q8BHJ6 (Serinc5)
Protein Information
| Accession | Q8BHJ6 |
|---|---|
| Protein Names | Serine incorporator 5 (Axotomy-induced glycoprotein 3) (AIGP-3) |
| Gene Symbol | Serinc5 |
| Organism | Mus musculus (Mouse) |
| Length | 461 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34200797 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSARCCAGQL11ACCCGSAGCS21LCCGCCPKFR31QSRTTRFMYL41FYFILVIALC
51-10051CVMMTPSVMK61QVKDHIPFFE71EFCKKTQAGG81DACENLVGYS91AVYRVCFGMA
101-150101CFFALFCLLT111LKVNNSKSCR121AYIHNGFWFF131KLLLLGAMCS141GAFFIPDQET
151-200151FLKVWRYVGA161GGSFLFICIQ171LLLIVQFAHK181WNKNWTAGTV191RNKLWYASLS
201-250201LVTLIMYSVA211VGGLALMAVF221YTQWDDCMDN231KILLGVHGGL241CVLISLVAIS
251-300251PCVQNRQPHS261GLLQSGLISC271YVTYLTFSAL281TSKPEKKVLD291EHGKNVTICA
301-350301PDFGQDLHRD311ENMVTWLGTL321LLIVCISYSC331LTSTTRSSSD341ALQSRYGAPE
351-400351LEVARCCFCF361GPDGEDTEEQ371QNVKKGPRVI381YDEKKGTVYS391YSYFHFVFFL
401-450401ASLYVMMTLT411SWFHYENATI421KTFFSGWSVF431WVKMASCWMC441VLLYLQTLVA
451-461451PLCCPSRQFS461V
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 5 | Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.02
|
|
| 6 | Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
|
| 12 | Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
Deep-Palm: 0.02
|
|
| 13 | Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.03
|
|
| 14 | Serine incorporator/TMS membrane protein Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
Deep-Palm: 0.10
|
|
| 19 | Serine incorporator/TMS membrane protein Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
Deep-Palm: 0.13
|
|
| 22 | Serine incorporator/TMS membrane protein | - | - |
Deep-Palm: 0.46
|
|
| 23 | Serine incorporator/TMS membrane protein | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.32
|
|
| 25 | Serine incorporator/TMS membrane protein | - | - |
Deep-Palm: 0.41
|
|
| 26 | Serine incorporator/TMS membrane protein | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.30
|
|
| 50 | Serine incorporator/TMS membrane protein | - | - |
Deep-Palm: 0.05
|
|
| 51 | - | - | - |
Deep-Palm: 0.05
|
|
| 73 | Serine incorporator (Serinc) |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.64
|
|
| 83 | - | - | - |
Deep-Palm: 0.63
|
|
| 96 | - | - | - |
Deep-Palm: 0.15
|
|
| 101 | - | - | - |
Deep-Palm: 0.27
|
|
| 107 | - | - | - |
Deep-Palm: 0.42
|
|
| 119 | - | - | - |
Deep-Palm: 0.82
|
|
| 139 | - | - | - |
Deep-Palm: 0.88
|
|
| 168 | - | - | - |
Deep-Palm: 0.31
|
|
| 227 | - | - | - |
Deep-Palm: 0.37
|
|
| 241 | - | - | - |
Deep-Palm: 0.91
|
|
| 252 | - | - | - |
Deep-Palm: 0.91
|
|
| 270 | - | - | - |
Deep-Palm: 0.85
|
|
| 299 | - | - | - |
Deep-Palm: 0.83
|
|
| 325 | - | - | - |
Deep-Palm: 0.70
|
|
| 330 | - | - | - |
Deep-Palm: 0.94
|
|
| 356 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(34200797)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.90
|
| 357 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.88
|
| 359 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.86
|
| 437 | - | - | - |
Deep-Palm: 0.10
|
|
| 440 | - | - | - |
Deep-Palm: 0.11
|
|
| 453 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.04
|
|
| 454 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.05
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
Brain
Specificity: 0.200
4/4 (100.0%)
3
Liver
Specificity: 0.150
3/3 (100.0%)
1
Testis
Specificity: 0.050
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.600
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.