Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BHL7 | Cdc42se1 | CDC42 small effector protein 1 | Mus musculus (Mouse) | 80 aa |
Protein Details: Q8BHL7 (Cdc42se1)
Protein Information
| Accession | Q8BHL7 |
|---|---|
| Protein Names | CDC42 small effector protein 1 |
| Gene Symbol | Cdc42se1 |
| Organism | Mus musculus (Mouse) |
| Length | 80 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 31311849 31772009 34200797 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSEFWHKLGC11CVVEKPQPKK21KRRRIDRTMI31GEPMNFVHLT41HIGSGEMGAG
51-8051DGLAMTGAVQ61EQMRSKGNHR71DRPWSNSRAL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 10 | SWISSPALM DBPTM CYSMODDB | CDC42 small effector protein |
Brain
(31311849)
Brain
(34200797)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.91
Deep-Palm: 0.04
|
| 11 | SWISSPALM DBPTM CYSMODDB | CDC42 small effector protein |
Brain
(31311849)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.93
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.300
3
Brain
Specificity: 0.100
3/3 (100.0%)
3
Liver
Specificity: 0.100
3/3 (100.0%)
2
Testis
Specificity: 0.067
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.033
1/1 (100.0%)
1
NSC
Specificity: 0.033
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
20
Brain tissue (Mass)
Specificity: 0.667
20/56 (35.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.