Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BJ64 | Chdh | Choline dehydrogenase, mitochondrial (CDH) (CHD) … | Mus musculus (Mouse) | 596 aa |
Protein Details: Q8BJ64 (Chdh)
Protein Information
| Accession | Q8BJ64 |
|---|---|
| Protein Names | Choline dehydrogenase, mitochondrial (CDH) (CHD) (EC 1.1.99.1) |
| Gene Symbol | Chdh |
| Organism | Mus musculus (Mouse) |
| Length | 596 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MWQVLRGWRK11GWQSPRGALA21WAVQGQPCPP31CSRAVASVGK41DEYTFVVVGA
51-10051GSAGCVLASR61LTEDPNHRVL71LLEAGPKDLL81MGSKRLQWKI91HMPAALVSNL
101-150101CDDKYNWYYH111TEPQPGMDSR121VLYWPRGRVW131GGSSSLNAMV141YIRGHAEDYN
151-200151RWHREGAEGW161DYAHCLPYFR171KAQRHELGAN181MYRGGDGPLH191VSRGKTNHPL
201-250201HQAFLQAARQ211AGYPFTEDMN221GFQQEGFGWM231DMTVHQGKRW241STACAYLHPV
251-300251LSRPNLRAEV261QTLVSRVLFE271GTRAVGVEYI281KDGQRHKAYV291SREVILSGGA
301-350301INSPQLLMLS311GVGNADDLRK321LDIPVVCHLP331GVGQNLQDHL341EVYVQQACTQ
351-400351PITLHSAQKP361LRKVCIGLEW371LWSYTGDGAT381AHLETGGFIR391SRPGVPHPDI
401-450401QFHFLPSQVI411DHGRKPTQQE421AYQVHVGTMR431ATSVGWLKLR441SANPRDHPVI
451-500451HPNYLSTETD461VEDFRQCVRL471SREIFAQEAL481APFRGKELQP491GSHVQSDKEI
501-550501DAFVRAKADS511AYHPSCTCKM521GRSSDPTAVV531DAQTKVIGVE541NLRVVDASIM
551-596551PSVVSGNLNA561PTVMIAEKAA571DIIKGHPALE581DKNVPVYKPQ591TLDTQR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 28 | - | - | - |
Deep-Palm: 0.92
|
|
| 31 | - | - | - |
Deep-Palm: 0.91
|
|
| 55 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
|
| 101 | - | - | - |
Deep-Palm: 0.03
|
|
| 165 | SWISSPALM DBPTM CYSMODDB | GMC oxidoreductase |
Liver
(28526873)
| - |
Deep-Palm: 0.85
|
| 244 | SWISSPALM DBPTM CYSMODDB | GMC oxidoreductase |
liver
(26165157)
|
Liver
(34884899)
|
Deep-Palm: 0.37
|
| 327 | - | - | - |
Deep-Palm: 0.96
|
|
| 348 | - | - | - |
Deep-Palm: 0.73
|
|
| 365 | - | - | - |
Deep-Palm: 0.81
|
|
| 467 | - | - | - |
Deep-Palm: 0.96
|
|
| 516 | - | - | - |
Deep-Palm: 0.72
|
|
| 518 | - | - | - |
Deep-Palm: 0.59
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
6
Liver
Specificity: 0.750
6/6 (100.0%)
2
Testis
Specificity: 0.250
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.