Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BJU2 | Tspan9 | Tetraspanin-9 (Tspan-9) (Tetraspan NET-5) | Mus musculus (Mouse) | 239 aa |
Protein Details: Q8BJU2 (Tspan9)
Protein Information
| Accession | Q8BJU2 |
|---|---|
| Protein Names | Tetraspanin-9 (Tspan-9) (Tetraspan NET-5) |
| Gene Symbol | Tspan9 |
| Organism | Mus musculus (Mouse) |
| Length | 239 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MARGCLCCLK11YTMFLFNLIF21WLCGCGLLGV31GIWLSVSQGN41FATFSPSFPS
51-10051LSAANLVIAI61GTIVMVTGFL71GCLGAIKENK81CLLLSFFIVL91LIILLAELIL
101-150101IILFFVYMDK111VNENAKQDLK121EGLLLYNTEN131NVGLKNAWNI141IQAEMRCCGV
151-200151TDYTDWYPVL161GENTVPDRCC171MENSQGCGRN181STTPLWRTGC191YEKVKLWFDD
201-239201NKHVLGTVGM211CILIMQILGM221AFSMTLFQHI231HRTGKKYDA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 5 | Prokaryotic membrane lipoprotein lipid attachment site profile. |
Brain
(34200797)
| - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
|
| 7 | Prokaryotic membrane lipoprotein lipid attachment site profile. |
Brain
(34200797)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.02
|
|
| 8 | Tetraspanin family Prokaryotic membrane lipoprotein lipid attachment site profile. |
Brain
(34200797)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.02
|
|
| 23 | Prokaryotic membrane lipoprotein lipid attachment site profile. Tetraspanin/Peripherin | - | - |
Deep-Palm: 0.75
|
|
| 25 | Tetraspanin/Peripherin Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
Deep-Palm: 0.19
|
|
| 72 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.97
|
|
| 81 | - | - | - |
Deep-Palm: 0.97
|
|
| 147 | SWISSPALM DBPTM CYSMODDB | Tetraspanin family |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.68
|
| 148 | SWISSPALM DBPTM CYSMODDB | Tetraspanin family |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.65
|
| 169 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.21
|
|
| 170 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.23
|
|
| 177 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.12
|
|
| 190 | - | - | - |
Deep-Palm: 0.55
|
|
| 211 | - | - | - |
Deep-Palm: 0.10
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.625
5
Liver
Specificity: 0.312
5/5 (100.0%)
2
Brain
Specificity: 0.125
2/2 (100.0%)
1
Testis
Specificity: 0.062
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
6
Brain tissue (Mass)
Specificity: 0.375
6/56 (10.7%)
2
Liver tissue (Mass)
Specificity: 0.125
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.