Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BK08 | Tmem11 | Transmembrane protein 11, mitochondrial (Protein … | Mus musculus (Mouse) | 190 aa |
Protein Details: Q8BK08 (Tmem11)
Protein Information
| Accession | Q8BK08 |
|---|---|
| Protein Names | Transmembrane protein 11, mitochondrial (Protein PM1) |
| Gene Symbol | Tmem11 |
| Organism | Mus musculus (Mouse) |
| Length | 190 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAWGRRRLG11PGGGGSRERV21SLSATDCYIV31HEIYSGENAQ41DQFEYELEQA
51-10051LEAQYKYIVI61EPTRIGDETA71RWITVGNCLH81KTAVLAGTAC91LFTPLALPLD
101-150101YSHYISLPAG111VLSLACCTLY121GISWQFDPCC131KYQVEYDAYK141LSRLPLHTLT
151-190151SSTPVVLVRK161DDLHRKRLHN171TIALAALVYC181VKKVYELYAV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 27 | Transmembrane protein 11 | - | - |
Deep-Palm: 0.83
|
|
| 78 | SWISSPALM DBPTM CYSMODDB | Mitochondrial morphogenesis regulator |
Brain
(31311849)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.86
Deep-Palm: 0.92
|
| 90 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.90
|
|
| 116 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.36
|
|
| 117 | - | - | - |
Deep-Palm: 0.38
|
|
| 129 | - | - | - |
Deep-Palm: 0.28
|
|
| 130 | - | - | - |
Deep-Palm: 0.35
|
|
| 180 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.31
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
Brain
Specificity: 0.138
4/4 (100.0%)
2
Liver
Specificity: 0.069
2/2 (100.0%)
2
Testis
Specificity: 0.069
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
21
Brain tissue (Mass)
Specificity: 0.724
21/56 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.