Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BLE7 | Slc17a6 | Vesicular glutamate transporter 2 (VGluT2) … | Mus musculus (Mouse) | 582 aa |
Protein Details: Q8BLE7 (Slc17a6)
Protein Information
| Accession | Q8BLE7 |
|---|---|
| Protein Names | Vesicular glutamate transporter 2 (VGluT2) (Differentiation-associated BNPI) (Differentiation-associated Na(+)-dependent inorganic phosphate cotransporter) (Solute carrier family 17 member 6) |
| Gene Symbol | Slc17a6 |
| Organism | Mus musculus (Mouse) |
| Length | 582 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MESVKQRILA11PGKEGIKNFA21GKSLGQIYRV31LEKKQDNRET41IELTEDGKPL
51-10051EVPEKKAPLC61DCTCFGLPRR71YIIAIMSGLG81FCISFGIRCN91LGVAIVDMVN
101-150101NSTIHRGGKV111IKEKAKFNWD121PETVGMIHGS131FFWGYIITQI141PGGYIASRLA
151-200151ANRVFGAAIL161LTSTLNMLIP171SAARVHYGCV181IFVRILQGLV191EGVTYPACHG
201-250201IWSKWAPPLE211RSRLATTSFC221GSYAGAVIAM231PLAGILVQYT241GWSSVFYVYG
251-300251SFGMVWYMFW261LLVSYESPAK271HPTITDEERR281YIEESIGESA291NLLGAMEKFK
301-350301TPWRKFFTSM311PVYAIIVANF321CRSWTFYLLL331ISQPAYFEEV341FGFEISKVGM
351-400351LSAVPHLVMT361IIVPIGGQIA371DFLRSKQILS381TTTVRKIMNC391GGFGMEATLL
401-450401LVVGYSHTRG411VAISFLVLAV421GFSGFAISGF431NVNHLDIAPR441YASILMGISD
451-500451GVGTLSGMVC461PIIVGAMTKN471KSREEWQYVF481LIAALVHYGG491VIFYALFASG
501-550501EKQPWADPEE511TSEEKCGFIH521EDELDEETGD531ITQNYINYGT541TKSYGATSQE
551-582551NGGWPNGWEK561KEEFVQEGAQ571DAYTYKDRDD581YS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 60 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.91
|
| 62 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.91
|
| 64 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.88
|
| 82 | - | - | - |
Deep-Palm: 0.44
|
|
| 89 | - | - | - |
Deep-Palm: 0.10
|
|
| 179 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.67
|
|
| 198 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.67
|
|
| 220 | - | - | - |
Deep-Palm: 0.74
|
|
| 321 | - | - | - |
Deep-Palm: 0.04
|
|
| 390 | - | - | - |
Deep-Palm: 0.92
|
|
| 460 | - | - | - |
Deep-Palm: 0.64
|
|
| 516 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.40
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Brain
Specificity: 0.143
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
24
Brain tissue (Mass)
Specificity: 0.857
24/56 (42.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.