Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BMK4 | Ckap4 | Cytoskeleton-associated protein 4 (63-kDa cytoskeleton-linking … | Mus musculus (Mouse) | 575 aa |
Protein Details: Q8BMK4 (Ckap4)
Protein Information
| Accession | Q8BMK4 |
|---|---|
| Protein Names | Cytoskeleton-associated protein 4 (63-kDa cytoskeleton-linking membrane protein) (Climp-63) (p63) |
| Gene Symbol | Ckap4 |
| Organism | Mus musculus (Mouse) |
| Length | 575 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29575903 29733200 31772009 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPSAKQRGSK11GGHGAASPSD21KGAHPSGGAD31DVAKKPPAAP41QQPQPPAPHP
51-10051PQHPQNQAHR61GGHRGRSSAA71TANASSASCS81RRLGRVLNFL91FYLSLVAAAA
101-150101FSGWYVHHVL111EEVQQVRRGH121QDFSRQRDEL131GQGLQGVEQK141VQSLQATFGT
151-200151FESLLRNSQH161KQDLTEKAVK171EGESELNRIS181EVLQKLQNEI191LKDLSDGIHV
201-250201VKDARERDFT211SLENTVEERL221TELTKSINDN231IAIFTDVQKR241SQKEINEVKM
251-300251KVASLEESKG261DRSQDVKTLK271DAVKEVQASM281MSRERDIEAL291KSSLQTMESD
301-350301VYTEVRELVS311LKQEQQAFKQ321AADSERLALQ331ALTEKLLRSE341ESSSRLPEDI
351-400351RRLEEELQQL361KVGAHGSEEG371AVFKDSKALE381ELQRQIEGLG391ARLQYVEDGV
401-450401YSMQVASARH411TESLESLLSK421SQEYEQRLAM431LQEHVGNLGS441SSDLASTVRS
451-500451LGETQLALSS461DLKELKQSLG471ELPGTVESLQ481EQVLSLLSQD491QAQAEGLPPQ
501-550501DFLDRLSSLD511NLKSSVSQVE521SDLKMLRTAV531DSLVAYSVKI541ETNENNLESA
551-575551KGLLDDLRND561LDRLFLKVEK571IHEKI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 79 | - |
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.312
5
Liver
Specificity: 0.200
5/5 (100.0%)
4
Raw 264.7
Specificity: 0.160
4/4 (100.0%)
4
Brain
Specificity: 0.160
4/4 (100.0%)
2
Testis
Specificity: 0.080
2/2 (100.0%)
1
NSC
Specificity: 0.040
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.360
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.