Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BP47 | Nars1 | Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) … | Mus musculus (Mouse) | 559 aa |
Protein Details: Q8BP47 (Nars1)
Protein Information
| Accession | Q8BP47 |
|---|---|
| Protein Names | Asparagine--tRNA ligase, cytoplasmic (EC 6.1.1.22) (Asparaginyl-tRNA synthetase) (AsnRS) (Asparaginyl-tRNA synthetase 1) |
| Gene Symbol | Nars1 |
| Organism | Mus musculus (Mouse) |
| Length | 559 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29575903 29660268 29733200 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSSEVIRGTA11EMVLAELYVS21DREGNDATGD31GTKEKPFKTG41LKALMTVGKE
51-10051PFPTIYVDSQ61KENERWDVIS71KSQMKNIKKM81WHREQMKNDS91REKKEAEDNL
101-150101RREKNLEEAK111KIIIKNDPSL121PEPACVKISA131LEGYRGQRVK141VFGWVHRLRR
151-200151QGKNLMFLVL161RDGTGYLQCV171LSDDLCQCYN181GVVLSTESSV191AVYGTLNLTP
201-250201KGKQAPGGHE211LSCDFWELVG221LAPAGGADNL231INEESDVDVQ241LNNRHMMIRG
251-300251ENMSKILKAR261SMITRCFRDH271FFDRGYCEVT281TPTLVQTQVE291GGATLFKLDY
301-350301FGEEAFLTQS311SQLYLETCLP321ALGDVFCIAQ331SYRAEQSRTR341RHLAEFTHVE
351-400351AECPFLTFED361LLNRLEDLVC371DVVDRVLKSP381VASIVYELNP391NFKPPKRPFR
401-450401RMNYSDAIEW411LKEHDVKKED421GTFYEFGDDI431PEAPERLMTD441TINEPILLCR
451-500451FPVEIKSFYM461QRCPEDPRLT471ESVDVLMPNV481GEIVGGSMRS491WDSEEILEGY
501-550501KREGIDPAPY511YWYTDQRKYG521TCPHGGYGLG531LERFLSWILN541RYHIRDVCLY
551-559551PRFLQRCRP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 125 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 169 | - | - | - |
Deep-Palm: 0.53
|
|
| 176 | - | - | - |
Deep-Palm: 0.59
|
|
| 178 | - | - | - |
Deep-Palm: 0.49
|
|
| 213 | - | - | - |
Deep-Palm: 0.89
|
|
| 266 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.77
|
|
| 277 | SWISSPALM DBPTM CYSMODDB | tRNA synthetases class II (D K and N) |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.86
|
| 318 | - | - | - |
Deep-Palm: 0.88
|
|
| 327 | - | - | - |
Deep-Palm: 0.84
|
|
| 353 | - | - | - |
Deep-Palm: 0.94
|
|
| 370 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.95
|
| 449 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.64
|
| 463 | - | - | - |
Deep-Palm: 0.63
|
|
| 522 | SWISSPALM DBPTM CYSMODDB | tRNA synthetases class II (D K and N) |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.75
|
| 548 | - | - | - |
Deep-Palm: 0.02
|
|
| 557 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
4
Liver
Specificity: 0.211
4/4 (100.0%)
3
Brain
Specificity: 0.158
3/3 (100.0%)
2
Testis
Specificity: 0.105
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.053
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.474
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.