Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BSE0 | Rmdn2 | Regulator of microtubule dynamics protein … | Mus musculus (Mouse) | 410 aa |
Protein Details: Q8BSE0 (Rmdn2)
Protein Information
| Accession | Q8BSE0 |
|---|---|
| Protein Names | Regulator of microtubule dynamics protein 2 (RMD-2) (mRMD-2) (Protein FAM82A1) |
| Gene Symbol | Rmdn2 |
| Organism | Mus musculus (Mouse) |
| Length | 410 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPHSTNKELI11LGIMAGTAGI21SLLAFWYHKV31LKPRTTMNFP41KLLSLGKKFG
51-10051SLTLPEESHS61AQGASVVFQR71RQLQILEKLN81ELLTNMEELK91EEIRFLKETI
101-150101PKLEECIQDE111FGGKVTVHKI121SPQHRARKKK131GTTVQRSATS141NSSEEAESEG
151-200151GYITANTDTE161EQNFPFPKAL171NTHIEELKLD181VLLQKADHLR191TNESHKMESF
201-250201ELLCDHKEKF211SEETEFLWRL221ARAYGDMYDL231STSTQEKKHY241ANIGKTLGER
251-300251AITRAPMNGH261CHLWYAVLCG271YVSEFEGLQN281KINCGHLFKK291HLEIAIQLLP
301-350301EEPLLYYLKG311RYCYTVSRLS321WIEKKMAATL331FGEIPYSTVH341EALHNFLKTE
351-400351ELQPGYSMSN361YMYTAKCYVE371LGEPQEACKF381CNLALLLPVV391TKEDKDAHKE
401-410401VKKMISSLKR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 106 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.97
|
| 204 | - | - | - |
Deep-Palm: 0.48
|
|
| 261 | - | - | - |
Deep-Palm: 0.24
|
|
| 269 | - | - | - |
Deep-Palm: 0.04
|
|
| 284 | - | - | - |
Deep-Palm: 0.69
|
|
| 313 | SWISSPALM DBPTM CYSMODDB | Regulator of microtubule dynamics protein 1-3 |
Liver
(28526873)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.96
|
| 367 | - | - | - |
Deep-Palm: 0.09
|
|
| 378 | - | - | - |
Deep-Palm: 0.94
|
|
| 381 | SWISSPALM DBPTM CYSMODDB | Regulator of microtubule dynamics protein 1-3 |
Liver
(28526873)
| - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
6
Liver
Specificity: 0.750
6/6 (100.0%)
2
Testis
Specificity: 0.250
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.