Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BU14 | Sec62 | Translocation protein SEC62 (Translocation protein … | Mus musculus (Mouse) | 398 aa |
Protein Details: Q8BU14 (Sec62)
Protein Information
| Accession | Q8BU14 |
|---|---|
| Protein Names | Translocation protein SEC62 (Translocation protein 1) (TP-1) |
| Gene Symbol | Sec62 |
| Organism | Mus musculus (Mouse) |
| Length | 398 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAERRRHKKR11IQEVGEPSKE21EKAVAKYLRF31NCPTKSTNMM41GHRVDYFIAS
51-10051KAVECLLDSK61WAKAKKGEDA71LFTTRESVVD81YCNRLLKKQF91FHRALKVMKM
101-150101KYDKDVKKEK111DKGKSESGKE121DDKKSKKESV131KEEKTKKEKE141KKKDGEKEDS
151-200151KKEETPGTPK161KKETKKKFKL171EPHDDQVFLD181GNEVFVWIYD191PVHIKTFVMG
201-250201LILVIAVIAA211TLFPLWPAEM221RVGVYYLSVG231AGCFVASILL241LAIARCILFL
251-300251IIWLITGGRH261HFWFLPNLTA271DVGFIDSFRP281LYTHEYKGPK291ADLKKDEKSE
301-350301TKKQQKSDSE311EKSDSEKKED321EEGKGAPADH331GPEGSGGERH341SDTDSDRRED
351-398351DRSQHSSGNG361NDFEMITKEE371LEQQTDGDCD381EEDDDKDGEV391PKSAHEKS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 32 | Translocation protein Sec62 | - | - |
Deep-Palm: 0.64
|
|
| 55 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.92
Deep-Palm: 0.96
|
| 82 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.87
|
| 233 | - | - | - |
Deep-Palm: 0.94
|
|
| 246 | - | - | - |
Deep-Palm: 0.95
|
|
| 379 | - | - | - |
Deep-Palm: 0.44
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.667
4/4 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.