Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BU31 | Rap2c | Ras-related protein Rap-2c (EC 3.6.5.2) | Mus musculus (Mouse) | 183 aa |
Protein Details: Q8BU31 (Rap2c)
Protein Information
| Accession | Q8BU31 |
|---|---|
| Protein Names | Ras-related protein Rap-2c (EC 3.6.5.2) |
| Gene Symbol | Rap2c |
| Organism | Mus musculus (Mouse) |
| Length | 183 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29575903 29733200 31772009 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MREYKVVVLG11SGGVGKSALT21VQFVTGTFIE31KYDPTIEDFY41RKEIEVDSSP
51-10051SVLEILDTAG61TEQFASMRDL71YIKNGQGFIL81VYSLVNQQSF91QDIKPMRDQI
101-150101VRVKRYEKVP111LILVGNKVDL121EPEREVMSSE131GRALAQEWGC141PFMETSAKSK
151-183151SMVDELFAEI161VRQMNYSSLP171EKQDQCCTTC181VVQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 140 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.98
|
|
| 176 | DBPTM | - | - | - |
Deep-Palm: 0.02
|
| 177 | DBPTM | - | - | - |
Deep-Palm: 0.02
|
| 180 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.385
5
Liver
Specificity: 0.172
5/5 (100.0%)
4
Raw 264.7
Specificity: 0.138
4/4 (100.0%)
2
Testis
Specificity: 0.069
2/2 (100.0%)
1
Brain
Specificity: 0.034
1/1 (100.0%)
1
NSC
Specificity: 0.034
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
16
Brain tissue (Mass)
Specificity: 0.552
16/56 (28.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.