Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BUV3 | Gphn | Gephyrin [Includes: Molybdopterin adenylyltransferase (MPT … | Mus musculus (Mouse) | 769 aa |
Protein Details: Q8BUV3 (Gphn)
Protein Information
| Accession | Q8BUV3 |
|---|---|
| Protein Names | Gephyrin [Includes: Molybdopterin adenylyltransferase (MPT adenylyltransferase) (EC 2.7.7.75) (Domain G); Molybdopterin molybdenumtransferase (MPT Mo-transferase) (EC 2.10.1.1) (Domain E) (Mo insertase)] |
| Gene Symbol | Gphn |
| Organism | Mus musculus (Mouse) |
| Length | 769 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34200797 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MATEGMILTN11HDHQIRVGVL21TVSDSCFRNL31AEDRSGINLK41DLVQDPSLLG
51-10051GTISAYKIVP61DEIEEIKETL71IDWCDEKELN81LILTTGGTGF91APRDVTPEAT
101-150101KEVIEREAPG111MALAMLMGSL121NVTPLGMLSR131PVCGIRGKTL141IINLPGSKKG
151-200151SQECFQFILP161ALPHAIDLLR171DAIVKVKEVH181DELEDLPSPP191PPLSPPPTTS
201-250201PHKQTEDKGV211QCEEEEEEKK221DSGVASTEDS231SSSHITAAAL241AAKIPDSIIS
251-300251RGVQVLPRDT261ASLSTTPSES271PRAQATSRLS281TASCPTPKQI291RRPDESKGVA
301-350301SRVGSLKARL311PSCSSTYSVS321EVQSRCSSKE331NILRASHSAV341DITKVARRHR
351-400351MSPFPLTSMD361KAFITVLEMT371PVLGTEIINY381RDGMGRVLAQ391DVYAKDNLPP
401-450401FPASVKDGYA411VRAADGPGDR421FIIGESQAGE431QPTQTVMPGQ441VMRVTTGAPI
451-500451PCGADAVVQV461EDTELIRESD471DGTEELEVRI481LVQARPGQDI491RPIGHDIKRG
501-550501ECVLAKGTHM511GPSEIGLLAT521VGVTEVEVNK531FPVVAVMSTG541NELLNPEDDL
551-600551LPGKIRDSNR561STLLATIQEH571GYPTINLGIV581GDNPDDLLNA591LNEGISRADV
601-650601IITSGGVSMG611EKDYLKQVLD621IDLHAQIHFG631RVFMKPGLPT641TFATLDIDGV
651-700651RKIIFALPGN661PVSAVVTCNL671FVVPALRKMQ681GILDPRPTII691KARLSCDVKL
701-750701DPRPEYHRCI711LTWHHQEPLP721WAQSTGNQMS731SRLMSMRSAN741GLLMLPPKTE
751-769751QYVELHKGEV761VDVMVIGRL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 26 | SWISSPALM DBPTM CYSMODDB | MoaB/Mog-like domain superfamily |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.97
|
| 74 | - | - | - |
Deep-Palm: 0.93
|
|
| 133 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
|
| 154 | - | - | - |
Deep-Palm: 0.95
|
|
| 212 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.65
|
|
| 284 | - |
Brain
(34200797)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.91
|
|
| 313 | - | - | - |
Deep-Palm: 0.98
|
|
| 326 | - | - | - |
Deep-Palm: 0.68
|
|
| 452 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.95
|
|
| 502 | - | - | - |
Deep-Palm: 0.83
|
|
| 668 | - | - | - |
Deep-Palm: 0.91
|
|
| 696 | - | - | - |
Deep-Palm: 0.80
|
|
| 709 | - | - | - |
Deep-Palm: 0.19
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.571
4
Liver
Specificity: 0.118
4/4 (100.0%)
3
Brain
Specificity: 0.088
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
27
Brain tissue (Mass)
Specificity: 0.794
27/56 (48.2%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.