Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q8BVA5 Ldah Lipid droplet-associated hydrolase (EC 3.1.1.13) … Mus musculus (Mouse) 326 aa

Protein Details: Q8BVA5 (Ldah)

Protein Information
AccessionQ8BVA5
Protein NamesLipid droplet-associated hydrolase (EC 3.1.1.13) (Lipid droplet-associated serine hydrolase) (mLDAH)
Gene SymbolLdah
OrganismMus musculus (Mouse)
Length326 aa
IsoformsNo isoforms
Related PMIDs 28526873 34884899 37925639
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MASEVEEQIP11VREEFFLCGG21VETKIIKCGP31WTNLFEKQDV41SKPKQLIFII
51-10051PGNPGYSAFY61VPFAKALYTL71MKSRFPVWII81SHAGFSVTPK91DKKVLAAPQE
101-150101ESNAQKIEDV111YGLNGQIEHK121IAFLRAHVPK131DVKLILIGHS141VGTYMTLHVM
151-200151KRVLELPVAH161AFLLFPTIER171MSESPNGKFA181TPFLCQFRYL191LYATSYLLFK
201-250201PCPEVIKSFI211IQKLMGQMNI221KLELPLTDIL231QPFCLANAAY241LGSQEMVQIV
251-300251KRDDDIIKEF261LPKLKFYYGK271TDGWCPVKYY281EDMKKDFPEG291NIYLCEKGIP
301-326301HAFVLDFSQE311MATIVAEWIN321NRPPRK
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
18 - - -
Deep-Palm: 0.62
28 - - -
Deep-Palm: 0.75
185 SWISSPALM DBPTM CYSMODDB Lipid-droplet associated hydrolase
Liver (28526873)
-
Deep-Palm: 0.81
202 - - -
Deep-Palm: 0.87
234 - - -
Deep-Palm: 0.94
275 - - -
Deep-Palm: 0.60
295 - - -
Deep-Palm: 0.67
Score Interpretation:
GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Liver
Specificity: 1.000
6/6 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine