Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8BYK4 | Rdh12 | Retinol dehydrogenase 12 (EC 1.1.1.300) | Mus musculus (Mouse) | 316 aa |
Protein Details: Q8BYK4 (Rdh12)
Protein Information
| Accession | Q8BYK4 |
|---|---|
| Protein Names | Retinol dehydrogenase 12 (EC 1.1.1.300) |
| Gene Symbol | Rdh12 |
| Organism | Mus musculus (Mouse) |
| Length | 316 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLFILVLLTS11FLSILYLTAP21SIRKFFAGGV31CTTNVQIPGK41VVVITGANTG
51-10051IGKETARELA61RRGARVYIAC71RDVLKGESAA81SEIRADTKNS91QVLVRKLDLS
101-150101DTKSIRAFAE111RFLAEEKKLH121ILINNAGVMM131CPYSKTTDGF141ETHFGVNHLG
151-200151HFLLTYLLLE161RLKESAPARV171VNLSSIAHLI181GKIRFHDLQG191QKRYCSAFAY
201-250201GHSKLANLLF211TRELAKRLQG221TGVTAYAVHP231GVVLSEITRN241SYLLCLLWRL
251-300251FSPFFKSTSQ261GAQTSLHCAL271AEDLEPLSGK281YFSDCKRMWV291SSRARNKKTA
301-316301ERLWNVSCEL311LGIQWE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 31 | NAD(P)-binding domain superfamily | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.94
|
|
| 70 | - | - | - |
Deep-Palm: 0.98
|
|
| 131 | - | - | - |
Deep-Palm: 0.73
|
|
| 195 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
Deep-Palm: 0.84
|
| 245 | - | - | - |
Deep-Palm: 0.96
|
|
| 268 | - | - | - |
Deep-Palm: 0.93
|
|
| 285 | - | - | - |
Deep-Palm: 0.97
|
|
| 308 | - | - | - |
Deep-Palm: 0.11
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Testis
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.