Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8C145 | Slc39a6 | Zinc transporter ZIP6 (Endoplasmic reticulum … | Mus musculus (Mouse) | 765 aa |
Protein Details: Q8C145 (Slc39a6)
Protein Information
| Accession | Q8C145 |
|---|---|
| Protein Names | Zinc transporter ZIP6 (Endoplasmic reticulum membrane-linked protein) (Ermelin) (Solute carrier family 39 member 6) (Zrt- and Irt-like protein 6) (ZIP-6) |
| Gene Symbol | Slc39a6 |
| Organism | Mus musculus (Mouse) |
| Length | 765 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MATDLSVIMI11LTFALWVTSP21LHELQSTAAF31SQTTEKINSN41WEPGVNVDLA
51-10051VTMQRHHLQQ61LFYRYGENDS71LSVEGFRKLL81QNIGIDKIKR91VHIHHDHEHH
101-150101ADHEHHSDHE111HHSDHEHHSD121HEHHSDHEHH131SDHEHHSHRS141HTVAGKNNRK
151-200151AFCPDLDSDN161SGKNPRTSLG171KGSRPAEHMN181GRRNIKESAS191SSEVTSAVYN
201-250201AVSEGTRFVE211TIETPKPGRR221TKDVNPSTPP231SITEKSRVGR241LSRLARKKSN
251-300251ESVSEPRKSF261MYSRNTNDNI271QECFNTTKLL281TSHGMSIQAL291LNATEFNYLC
301-350301PAIINQIDAR311ACLIHTASEK321KAEIPPKTYS331LQIAWLGGFI341AISIISFLSL
351-400351LGVILVPLMN361RVFFKFLLSF371LVALAVGTLS381GDALLHLLPH391SHASHQHSHS
401-450401HEEPAMEMKR411GPLFSHLSAQ421NIEESSYFDS431TWKGLTALGG441LYFMFLVEHV
451-500451LTLIKQFKDK461KKKNQKKPEN471DEDVESKKQL481SKYDSQLSSN491EEKVDPGERP
501-550501ESYLRADSQE511PSPFDSQQPT521MLEEEEVMIA531HAHPQEVYNE541YVPRGCKNKC
551-600551HSHFHDTLGQ561SDDLIHHHHD571YHHILHHHHH581QNHHPHSHSQ591RYSREELKDA
601-650601GIATLAWMVI611MGDGLHNFSD621GLAIGAAFTE631GLSSGLSTSV641AVFCHELPHE
651-700651LGDFAVLLKA661GMTVKQAVLY671NALSAMLAYL681GMATGIFIGH691YAENVSMWIF
701-750701ALTAGLFMYV711ALVDMVPEML721HNDASDHGCS731RWGYFFLQNA741GILLGFGIML
751-765751LISIFEHKIV761FRINF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 153 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.64
|
| 273 | - | - | - |
Deep-Palm: 0.06
|
|
| 300 | - | - | - |
Deep-Palm: 0.49
|
|
| 312 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.78
|
|
| 546 | - | - | - |
Deep-Palm: 0.02
|
|
| 550 | - | - | - |
Deep-Palm: 0.03
|
|
| 644 | - | - | - |
Deep-Palm: 0.92
|
|
| 729 | - | - | - |
Deep-Palm: 0.40
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.091
2/2 (100.0%)
1
Liver
Specificity: 0.045
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
19
Brain tissue (Mass)
Specificity: 0.864
19/56 (33.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.