Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8CI94 | Pygb | Glycogen phosphorylase, brain form (EC … | Mus musculus (Mouse) | 843 aa |
Protein Details: Q8CI94 (Pygb)
Protein Information
| Accession | Q8CI94 |
|---|---|
| Protein Names | Glycogen phosphorylase, brain form (EC 2.4.1.1) |
| Gene Symbol | Pygb |
| Organism | Mus musculus (Mouse) |
| Length | 843 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34200797 34884899 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAKPLTDSER11QKQISVRGIA21GLGDVAEVRK31SFNRHLHFTL41VKDRNVATPR
51-10051DYFFALAHTV61RDHLVGRWIR71TQQHYYERDP81KRIYYLSLEF91YMGRTLQNTM
101-150101VNLGLQTACD111EATYQLGLDL121EELEEIEEDA131GLGNGGLGRL141AACFLDSMAT
151-200151LGLAAYGYGI161RYEFGIFNQK171IVNGWQVEEA181DDWLRYGNPW191EKARPEYMLP
201-250201VHFYGRVEHT211PDGVLWLDTQ221VVLAMPYDTP231VPGYKNNTVN241TMRLWSAKAP
251-300251NDFKLKDFNV261GDYIEAVLDR271NLAENISRVL281YPNDNFFEGK291ELRLKQEYFV
301-350301VAATLQDIIR311RFKSSRFGCR321DPVRTCFETF331PDKVAIQLND341THPALSIPEL
351-400351MRILVDVEKV361DWDKAWEITK371KTCAYTNHTV381LPEALERWPV391SMFEKLLPRH
401-450401LEIIYAINQR411HLDHVAALFP421GDVDRLRRMS431VIEEGDCKRI441NMAHLCVIGS
451-500451HAVNGVARIH461SEIVKQSVFK471DFYELEPEKF481QNKTNGITPR491RWLLLCNPGL
501-550501AEIIVERIGE511GFLTDLSQLK521KLLSLVDDEA531FIRDVAKVKQ541ENKLKFSAQL
551-600551EKEYKVKINP561ASMFDVHVKR571IHEYKRQLLN581CLHIITLYNR591IKKDPAKAFV
601-650601PRTVMIGGKA611APGYHMAKMI621IKLVTSIGDV631VNHDPVVGDR641LRVIFLENYR
651-700651VSLAEKVIPA661ADLSQQISTA671GTEASGTGNM681KFMLNGALTI691GTMDGANVEM
701-750701AEEAGEENLF711IFGMRVEDVE721ALDQKGYNAR731EFYERLPELR741QAVDQISSGF
751-800751FSPKDPDCFK761DVVNMLMYHD771RFKVFADYEA781YIQCQAQVDR791LYRNSKEWTK
801-843801KVIRNIACSG811KFSSDRTITE821YAREIWGVEP831SDLQIPPPNL841PKD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 109 | - | - | - |
Deep-Palm: 0.94
|
|
| 143 | - | - | - |
Deep-Palm: 0.96
|
|
| 319 | - |
brain
(39008777)
| - |
Deep-Palm: 0.64
|
|
| 326 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.54
|
|
| 373 | Carbohydrate phosphorylase |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.51
|
|
| 437 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.76
|
|
| 446 | SWISSPALM DBPTM CYSMODDB | Carbohydrate phosphorylase |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.45
|
| 496 | - | - | - |
Deep-Palm: 0.96
|
|
| 581 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.79
|
|
| 758 | - | - | - |
Deep-Palm: 0.14
|
|
| 784 | - | - | - |
Deep-Palm: 0.23
|
|
| 808 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.68
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
Brain
Specificity: 0.167
4/4 (100.0%)
1
Liver
Specificity: 0.042
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
19
Brain tissue (Mass)
Specificity: 0.792
19/56 (33.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.