Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8CIE6 | Copa | Coatomer subunit alpha (Alpha-coat protein) … | Mus musculus (Mouse) | 1224 aa |
Protein Details: Q8CIE6 (Copa)
Protein Information
| Accession | Q8CIE6 |
|---|---|
| Protein Names | Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP) [Cleaved into: Xenin (Xenopsin-related peptide); Proxenin] |
| Gene Symbol | Copa |
| Organism | Mus musculus (Mouse) |
| Length | 1224 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29660268 29733200 34884899 37925639 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.633
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.633
19/19 (100.0%)
6
Liver membrane
Specificity: 0.200
6/6 (100.0%)
4
Brain tissue
Specificity: 0.133
4/12 (33.3%)
1
Macrophage Raw 264.7
Specificity: 0.033
1/2 (50.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MLTKFETKSA11RVKGLSFHPK21RPWILTSLHN31GVIQLWDYRM41CTLIDKFDEH
51-10051DGPVRGIDFH61KQQPLFVSGG71DDYKIKVWNY81KLRRCLFTLL91GHLDYIRTTF
101-150101FHHEYPWILS111ASDDQTIRVW121NWQSRTCVCV131LTGHNHYVMC141AQFHPSEDLV
151-200151VSASLDQTVR161VWDISGLRKK171NLSPGAVESD181VRGITGVDLF191GTTDAVVKHV
201-250201LEGHDRGVNW211AAFHPTMPLI221VSGADDRQVK231IWRMNESKAW241EVDTCRGHYN
251-300251NVSCAVFHPR261QELILSNSED271KSIRVWDMSK281RTGVQTFRRD291HDRFWVLAAH
301-350301PNLNLFAAGH311DGGMIVFKLE321RERPAYAVHG331NMLHYVKDRF341LRQLDFNSSK
351-400351DVAVMQLRSG361SKFPVFNMSY371NPAENAVLLC381TRASNLENST391YDLYTIPKDA
401-450401DSQNPDAPEG411KRSSGLTAVW421VARNRFAVLD431RMHSLLIKNL441KNEITKKIQV
451-500451PNCDEIFYAG461TGNLLLRDAD471SITLFDVQQK481RTLASVKISK491VKYVIWSADM
501-550501SHVALLAKHA511IVICNRKLDA521LCNIHENIRV531KSGAWDESGV541FIYTTSNHIK
551-600551YAVTTGDHGI561IRTLDLPIYV571TRVKGNNVYC581LDRECRPRVL591TIDPTEFKFK
601-650601LALINRKYDE611VLHMVRNAKL621VGQSIIAYLQ631KKGYPEVALH641FVKDEKTRFS
651-700651LALECGNIEI661ALEAAKALDD671KNCWEKLGEV681ALLQGNHQIV691EMCYQRTKNF
701-750701DKLSFLYLIT711GNLEKLRKMM721KIAEIRKDMS731GHYQNALYLG741DVSERVRILK
751-800751NCGQKSLAYL761SAATHGLDEE771AESLKETFDP781EKETIPDIDP791NAKLLQPPAP
801-850801IMPLDTNWPL811LTVSKGFFEG821SIASKGKGGA831LAADIDIDTV841GTEGWGEDAE
851-900851LQLDEDGFVE861APEGLGEDVL871GKGQEEGGGW881DVEEDLELPP891ELDVPSGVSG
901-950901SAEDGFFVPP911TKGTSPTQIW921CNNSQLPVDH931ILAGSFETAM941RLLHDQVGVI
951-1000951QFGPYKQLFL961QTYARGRTTY971QALPCLPSMY981SYPNRNWKDA991GLKNGVPAVG
1001-10501001LKLNDLIQRL1011QLCYQLTTVG1021KFEEAVEKFR1031SILLSVPLLV1041VDNKQEIAEA
1051-11001051QQLITICREY1061IVGLCMEIER1071KKLPKETLDQ1081QKRICEMAAY1091FTHSNLQPVH
1101-11501101MILVLRTALN1111LFFKLKNFKT1121AATFARRLLE1131LGPKPEVAQQ1141TRKILSACEK
1151-12001151NPTDACQLNY1161DMHNPFDICA1171ASYRPIYRGK1181PVEKCPLSGA1191CYSPEFKGQI
1201-12241201CRVTTVTEIG1211KDVIGLRISP1221LQFR
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 41 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | - | 28526873 |
| 245 | Experimental CYSMODDB SWISSPALM DBPTM | WDR5 beta-propeller domain | 28526873 |
| 254 | Experimental CYSMODDB SWISSPALM DBPTM | WDR5 beta-propeller domain | 28526873 |
| 380 | Experimental CYSMODDB SWISSPALM DBPTM | - | 28526873 |
| 453 | Experimental CYSMODDB SWISSPALM DBPTM | COPA/B second beta-propeller | 28526873 |
| 514 | Prediction (High) | - | - |
| 580 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | - | 28526873 |
| 752 | Prediction (High) | - | - |
| 1013 | Experimental CYSMODDB SWISSPALM DBPTM | Coatomer (COPI) alpha subunit C-terminus | 28526873 |
| 1057 | Experimental CYSMODDB SWISSPALM DBPTM | Coatomer (COPI) alpha subunit C-terminus | 28526873 |
| 1148 | Experimental | Coatomer (COPI) alpha subunit C-terminus | 39008777 |
| 1185 | Experimental | Coatomer (COPI) alpha subunit C-terminus | 39008777 |
| 1191 | Experimental | Coatomer (COPI) alpha subunit C-terminus | 39008777 |