Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8IUA7 | ABCA9 | ATP-binding cassette sub-family A member … | Homo sapiens (Human) | 1624 aa |
Protein Details: Q8IUA7 (ABCA9)
Protein Information
| Accession | Q8IUA7 |
|---|---|
| Protein Names | ATP-binding cassette sub-family A member 9 (EC 7.6.2.-) |
| Gene Symbol | ABCA9 |
| Organism | Homo sapiens (Human) |
| Length | 1624 aa |
| Isoforms | No isoforms |
| Related PMIDs | 33636221 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSKRRMSVGQ11QTWALLCKNC21LKKWRMKRQT31LLEWLFSFLL41VLFLYLFFSN
51-10051LHQVHDTPQM61SSMDLGRVDS71FNDTNYVIAF81APESKTTQEI91MNKVASAPFL
101-150101KGRTIMGWPD111EKSMDELDLN121YSIDAVRVIF131TDTFSYHLKF141SWGHRIPMMK
151-200151EHRDHSAHCQ161AVNEKMKCEG171SEFWEKGFVA181FQAAINAAII191EIATNHSVME
201-250201QLMSVTGVHM211KILPFVAQGG221VATDFFIFFC231IISFSTFIYY241VSVNVTQERQ
251-300251YITSLMTMMG261LRESAFWLSW271GLMYAGFILI281MATLMALIVK291SAQIVVLTGF
301-350301VMVFTLFLLY311GLSLITLAFL321MSVLIKKPFL331TGLVVFLLIV341FWGILGFPAL
351-400351YTRLPAFLEW361TLCLLSPFAF371TVGMAQLIHL381DYDVNSNAHL391DSSQNPYLII
401-450401ATLFMLVFDT411LLYLVLTLYF421DKILPAEYGH431RCSPLFFLKS441CFWFQHGRAN
451-500451HVVLENETDS461DPTPNDCFEP471VSPEFCGKEA481IRIKNLKKEY491AGKCERVEAL
501-550501KGVVFDIYEG511QITALLGHSG521AGKTTLLNIL531SGLSVPTSGS541VTVYNHTLSR
551-600551MADIENISKF561TGFCPQSNVQ571FGFLTVKENL581RLFAKIKGIL591PHEVEKEVQR
601-650601VVQELEMENI611QDILAQNLSG621GQNRKLTFGI631AILGDPQVLL641LDEPTAGLDP
651-700651LSRHRIWNLL661KEGKSDRVIL671FSTQFIDEAD681ILADRKVFIS691NGKLKCAGSS
701-750701LFLKKKWGIG711YHLSLHLNER721CDPESITSLV731KQHISDAKLT741AQSEEKLVYI
751-800751LPLERTNKFP761ELYRDLDRCS771NQGIEDYGVS781ITTLNEVFLK791LEGKSTIDES
801-850801DIGIWGQLQT811DGAKDIGSLV821ELEQVLSSFH831ETRKTISGVA841LWRQQVCAIA
851-900851KVRFLKLKKE861RKSLWTILLL871FGISFIPQLL881EHLFYESYQK891SYPWELSPNT
901-950901YFLSPGQQPQ911DPLTHLLVIN921KTGSTIDNFL931HSLRRQNIAI941EVDAFGTRNG
951-1000951TDDPSYNGAI961IVSGDEKDHR971FSIACNTKRL981NCFPVLLDVI991SNGLLGIFNS
1001-10501001SEHIQTDRST1011FFEEHMDYEY1021GYRSNTFFWI1031PMAASFTPYI1041AMSSIGDYKK
1051-11001051KAHSQLRISG1061LYPSAYWFGQ1071ALVDVSLYFL1081ILLLMQIMDY1091IFSPEEIIFI
1101-11501101IQNLLIQILC1111SIGYVSSLVF1121LTYVISFIFR1131NGRKNSGIWS1141FFFLIVVIFS
1151-12001151IVATDLNEYG1161FLGLFFGTML1171IPPFTLIGSL1181FIFSEISPDS1191MDYLGASESE
1201-12501201IVYLALLIPY1211LHFLIFLFIL1221RCLEMNCRKK1231LMRKDPVFRI1241SPRSNAIFPN
1251-13001251PEEPEGEEED1261IQMERMRTVN1271AMAVRDFDET1281PVIIASCLRK1291EYAGKKKNCF
1301-13501301SKRKKKIATR1311NVSFCVKKGE1321VIGLLGHNGA1331GKSTTIKMIT1341GDTKPTAGQV
1351-14001351ILKGSGGGEP1361LGFLGYCPQE1371NALWPNLTVR1381QHLEVYAAVK1391GLRKGDAMIA
1401-14501401ITRLVDALKL1411QDQLKAPVKT1421LSEGIKRKLC1431FVLSILGNPS1441VVLLDEPSTG
1451-15001451MDPEGQQQMW1461QVIRATFRNT1471ERGALLTTHY1481MAEAEAVCDR1491VAIMVSGRLR
1501-15501501CIGSIQHLKS1511KFGKDYLLEM1521KLKNLAQMEP1531LHAEILRLFP1541QAAQQERFSS
1551-16001551LMVYKLPVED1561VRPLSQAFFK1571LEIVKQSFDL1581EEYSLSQSTL1591EQVFLELSKE
1601-16241601QELGDLEEDF1611DPSVKWKLLL1621QEEP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 17 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.96
|
|
| 20 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.94
|
|
| 159 | - | - | - |
Deep-Palm: 0.06
|
|
| 168 | - | - | - |
Deep-Palm: 0.18
|
|
| 230 | - | - | - |
Deep-Palm: 0.10
|
|
| 363 | - | - | - |
Deep-Palm: 0.97
|
|
| 432 | - | - | - |
Deep-Palm: 0.30
|
|
| 441 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.40
|
|
| 467 | - | - | - |
Deep-Palm: 0.46
|
|
| 476 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.68
|
|
| 494 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.97
|
|
| 564 | - | - | - |
Deep-Palm: 0.54
|
|
| 696 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.95
|
|
| 721 | - | - | - |
Deep-Palm: 0.35
|
|
| 769 | - | - | - |
Deep-Palm: 0.64
|
|
| 847 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.97
|
|
| 975 | - | - | - |
Deep-Palm: 0.82
|
|
| 982 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.86
|
|
| 1110 | - | - | - |
Deep-Palm: 0.28
|
|
| 1222 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.68
|
|
| 1227 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.63
|
|
| 1287 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.86
|
|
| 1299 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.90
|
|
| 1315 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.96
|
|
| 1367 | - | - | - |
Deep-Palm: 0.96
|
|
| 1430 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.98
|
|
| 1488 | - | - | - |
Deep-Palm: 0.97
|
|
| 1501 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
heart
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 230 | C → Lfs*137 | 0.001887 | INS | Frame Shift Ins | UCEC |
| 360 | W → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 382 | Y → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 827 | S → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 853 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 853 | R → C | 0.004283 | SNP | Missense Mutation | SKCM |
| 853 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1029 | W → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 1299 | C → F | 0.001764 | SNP | Missense Mutation | LUAD |
| 1319 | G → C | 0.002506 | SNP | Missense Mutation | COAD |
| 1362 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1554 | Y → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 1583 | Y → C | 0.002747 | SNP | Missense Mutation | LIHC |
| 1616 | W → C | 0.001764 | SNP | Missense Mutation | LUAD |
| ? | ? → ? | 0.001764 | SNP | Missense Mutation | LUAD |
| 1367* | C → ? | 0.002033 | SNP | Nonsense Mutation | LUSC |
| ? | ? → ? | 0.002033 | SNP | Missense Mutation | LUSC |