Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8IYC8 | BACE1 | Beta-secretase 1 (EC 3.4.23.46) (Beta-site … | Homo sapiens (Human) | 501 aa |
Protein Details: Q8IYC8 (BACE1)
Protein Information
| Accession | Q8IYC8 |
|---|---|
| Protein Names | Beta-secretase 1 (EC 3.4.23.46) (Beta-site amyloid precursor protein cleaving enzyme 1) (Memapsin-2) (Membrane-associated aspartic protease 2) |
| Gene Symbol | BACE1 |
| Organism | Homo sapiens (Human) |
| Length | 501 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAQALPWLLL11WMGAGVLPAH21GTQHGIRLPL31RSGLGGAPLG41LRLPRETDEE
51-10051PEEPGRRGSF61VEMVDNLRGK71SGQGYYVEMT81VGSPPQTLNI91LVDTGSSNFA
101-150101VGAAPHPFLH111RYYQRQLFST121YRDLRKGVYV131PYTQGKWEGE141LGTDLVSIPH
151-200151GPNVTVRANI161AAITESDKFF171INGSNWEGIL181GLAYAEIARP191DDSLEPFFDS
201-250201LVKQTHVPNL211FSLQLCGAGF221PLNQSEVLAS231VGGSMIIGGI241DHSLYTGSLW
251-300251YTPIRREWYY261EVIIVRVEIN271GQDLKMDCKE281YNYDKSIVDS291GTTNLRLPKK
301-350301VFEAAVKSIK311AASSTEKFPD321GFWLGEQLVC331WQAGTTPWNI341FPVISLYLMG
351-400351EVTNQSFRIT361ILPQQYLRPV371EDVATSQDDC381YKFAISQSST391GTVMGAVIME
401-450401GFYVVFDRAR411KRIGFAVSAC421HVHDEFRTAA431VEGPFVTLDM441EDCGYNIPQT
451-500451DESTLMTIAY461VMAAICALFM471LPLCLMVCQW481RCLRCLRQQH491DDFADDISLL
501-501501K
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 216 | - | - | - |
Deep-Palm: 0.91
|
|
| 278 | - | - | - |
Deep-Palm: 0.07
|
|
| 330 | - | - | - |
Deep-Palm: 0.33
|
|
| 380 | - | - | - |
Deep-Palm: 0.60
|
|
| 420 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.87
|
|
| 443 | - | - | - |
Deep-Palm: 0.17
|
|
| 466 | - | - | - |
Deep-Palm: 0.09
|
|
| 474 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.50
|
| 478 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.78
|
| 482 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.63
|
| 485 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.58
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 239 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 296 | R → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 330 | C → W | 0.002545 | SNP | Missense Mutation | GBM |
| 487 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 487 | R → C | 0.007299 | SNP | Missense Mutation | READ |