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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q8JZU2 Slc25a1 Tricarboxylate transport protein, mitochondrial (Citrate … Mus musculus (Mouse) 311 aa

Protein Details: Q8JZU2 (Slc25a1)

Protein Information
AccessionQ8JZU2
Protein NamesTricarboxylate transport protein, mitochondrial (Citrate transport protein) (CTP) (Solute carrier family 25 member 1) (Tricarboxylate carrier protein)
Gene SymbolSlc25a1
OrganismMus musculus (Mouse)
Length311 aa
IsoformsNo isoforms
Related PMIDs 29733200 31311849 34884899 35358180 35477839 37925639
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAPRGPRAL11SAAAPGSGKP21KLTHPGKAIL31AGGLAGGIEI41CITFPTEYVK
51-10051TQLQLDERAN61PPRYRGIGDC71VRQTVRSHGV81LGLYRGLSSL91LYGSIPKAAV
101-150101RFGMFEFLSN111HMRDAQGRLD121SRRGLLCGLG131AGVAEAVVVV141CPMETIKVKF
151-200151IHDQTSSNPK161YRGFFHGVRE171IIREQGLKGT181YQGLTATVLK191QGSNQAIRFF
201-250201VMTSLRNWYQ211GDNHNKPMNP221LITGVFGATA231GAASVFGNTP241LDVIKTRMQG
251-300251LEAHKYRNTL261DCGLKILKNE271GPKAFYKGTV281PRLGRVCLDV291AIVFIIYDEV
301-311301VKLLNKVWKT311D
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
41 Mitochondrial substrate/solute carrier Mitochondrial carrier domain superfamily Tricarboxylate transport protein-like - -
Deep-Palm: 0.97
70 SWISSPALM DBPTM CYSMODDB Mitochondrial carrier protein
liver (26165157)
Brain (31311849)
Deep-Palm: 0.98
127 - - -
GPS-Palm: 0.93
Deep-Palm: 0.98
141 - - -
Deep-Palm: 0.97
262 SWISSPALM DBPTM CYSMODDB Mitochondrial carrier protein
liver (26165157)
Brain (31311849)
Deep-Palm: 0.98
287 - - -
Deep-Palm: 0.96
Score Interpretation:
GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
5
Liver
Specificity: 0.500
5/5 (100.0%)
3
Brain
Specificity: 0.300
3/3 (100.0%)
2
Testis
Specificity: 0.200
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine