Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8K1A5 | Tmem41b | Transmembrane protein 41B (Protein stasimon) | Mus musculus (Mouse) | 291 aa |
Protein Details: Q8K1A5 (Tmem41b)
Protein Information
| Accession | Q8K1A5 |
|---|---|
| Protein Names | Transmembrane protein 41B (Protein stasimon) |
| Gene Symbol | Tmem41b |
| Organism | Mus musculus (Mouse) |
| Length | 291 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAKGRVADRS11PTEMLHSTPA21GDRAVRTQGS31AAPGSKDHLN41EKPCAEAGSA
51-10051RTSLLILVSI61FSCAAFVMFL71VYKNFPQLSE81EERVNMKVPR91DMDDAKALGK
101-150101VLSKYKDTFY111VQVLVAYFAT121YIFLQTFAIP131GSIFLSILSG141FLYPFPLALF
151-200151LVCLCSGLGA161SFCYMLSYLV171GRPVVYKYLT181EKAVKWSQQV191ERHREHLINY
201-250201IIFLRITPFL211PNWFINITSP221VINVPLKVFF231IGTFLGVAPP241SFVAIKAGTT
251-291251LHQLTTAGEA261VSWSSVFILM271VLALLSILPA281IFQKQLKQKF291E
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 44 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.95
|
| 63 | - | - | - |
Deep-Palm: 0.80
|
|
| 153 | - | - | - |
Deep-Palm: 0.80
|
|
| 155 | - | - | - |
Deep-Palm: 0.76
|
|
| 163 | - | - | - |
Deep-Palm: 0.82
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.667
2/2 (100.0%)
1
Liver
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.