Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8K2B3 | Sdha | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, … | Mus musculus (Mouse) | 664 aa |
Protein Details: Q8K2B3 (Sdha)
Protein Information
| Accession | Q8K2B3 |
|---|---|
| Protein Names | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (Flavoprotein subunit of complex II) (Fp) (Malate dehydrogenase [quinone] flavoprotein subunit) (EC 1.1.5.-) |
| Gene Symbol | Sdha |
| Organism | Mus musculus (Mouse) |
| Length | 664 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAGVGAVSRL11LRGRRLALTG21AWPGTLQKQT31CGFHFSVGEN41KKASAKVSDA
51-10051ISTQYPVVDH61EFDAVVVGAG71GAGLRAAFGL81SEAGFNTACL91TKLFPTRSHT
101-150101VAAQGGINAA111LGNMEEDNWR121WHFYDTVKGS131DWLGDQDAIH141YMTEQAPASV
151-200151VELENYGMPF161SRTEDGKIYQ171RAFGGQSLKF181GKGGQAHRCC191CVADRTGHSL
201-250201LHTLYGRSLR211YDTSYFVEYF221ALDLLMENGE231CRGVIALCIE241DGSIHRIRAK
251-300251NTVIATGGYG261RTYFSCTSAH271TSTGDGTAMV281TRAGLPCQDL291EFVQFHPTGI
301-350301YGAGCLITEG311CRGEGGILIN321SQGERFMERY331APVAKDLASR341DVVSRSMTLE
351-400351IREGRGCGPE361KDHVYLQLHH371LPPEQLATRL381PGISETAMIF391AGVDVTKEPI
401-450401PVLPTVHYNM411GGIPTNYKGQ421VLKHVNGQDQ431IVPGLYACGE441AACASVHGAN
451-500451RLGANSLLDL461VVFGRACALS471IAESCRPGDK481VPSIKANAGE491ESVMNLDKLR
501-550501FADGSIRTSE511LRLNMQKSMQ521NHAAVFRVGS531VLQEGCEKIS541QLYGDLKHLK
551-600551TFDRGMVWNT561DLVETLELQN571LMLCALQTIY581GAEARKESRG591AHAREDYKVR
601-650601VDEYDYSKPI611QGQQKKPFGE621HWRKHTLSYV631DIKTGKVTLE641YRPVIDKTLN
651-664651EADCATVPPA661IRSY
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 31 | - | - | - |
Deep-Palm: 0.87
|
|
| 89 | SWISSPALM DBPTM CYSMODDB | FAD binding domain |
liver
(26165157)
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.97
|
| 189 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.81
|
|
| 190 | - |
Brain
(34200797)
MLE
(39008777)
| - |
Deep-Palm: 0.76
|
|
| 191 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.78
|
|
| 231 | - | - | - |
Deep-Palm: 0.78
|
|
| 238 | SWISSPALM DBPTM CYSMODDB | FAD binding domain |
liver
(26165157)
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.94
|
| 266 | SWISSPALM DBPTM CYSMODDB | FAD binding domain |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.89
|
| 287 | SWISSPALM DBPTM CYSMODDB | FAD binding domain |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.92
|
| 305 | SWISSPALM DBPTM CYSMODDB | FAD binding domain |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.89
|
| 311 | SWISSPALM DBPTM CYSMODDB | FAD binding domain |
Forebrain
(28680068)
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.95
|
| 357 | - | - | - |
Deep-Palm: 0.84
|
|
| 438 | SWISSPALM DBPTM CYSMODDB | FAD binding domain |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.95
|
| 443 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.98
|
|
| 467 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.98
|
| 475 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.96
|
| 536 | SWISSPALM DBPTM CYSMODDB | Fumarate reductase flavoprotein C-term |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.93
|
| 574 | - | - | - |
Deep-Palm: 0.95
|
|
| 654 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
|
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.10
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
6
Liver
Specificity: 0.143
6/6 (100.0%)
4
Brain
Specificity: 0.095
4/4 (100.0%)
2
Testis
Specificity: 0.048
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
30
Brain tissue (Mass)
Specificity: 0.714
30/56 (53.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.