Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8K363 | Ddx18 | ATP-dependent RNA helicase DDX18 (EC … | Mus musculus (Mouse) | 660 aa |
Protein Details: Q8K363 (Ddx18)
Protein Information
| Accession | Q8K363 |
|---|---|
| Protein Names | ATP-dependent RNA helicase DDX18 (EC 3.6.4.13) (DEAD box protein 18) |
| Gene Symbol | Ddx18 |
| Organism | Mus musculus (Mouse) |
| Length | 660 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSQLQMKLLR11RKIEKRNAKL21RQRNLKLQET31SDTSLSQPQN41GDVPKETGKG
51-10051GKVKKALKRS61VPVDSAEAQS71GGMPEETLEN81GKVKKSPQKL91TTLANGEAAP
101-150101TPPPDSEVKK111KKKKKRKMAN121DAGPDTKKAK131TEESAEACEE141PEDDVKKADD
151-200151SEVPSLPLGL161TGAFEDTSFA171SLSNLVNENT181LKAIEEMGFK191RMTEIQHKSI
201-250201RPLLEGRDLL211AAAKTGSGKT221LAFLIPVIEL231IVKLKFMPRN241GTGVLILSPT
251-300251RELAMQTFGV261LKELMTHHVH271TYGLIMGGSN281RSAEVQKLLN291GINIIVATPG
301-350301RLLDHMQNTP311GFMYKNLQCL321VIDEADRILD331VGFEEELKQI341IKLLPARRQT
351-400351MLFSATQTRK361VEDLARISLK371KEPLYVGVDD381DKEVATVDGL391EQGYVVCPSE
401-450401KRFLLLFTFL411KKNRKKKVMV421FFSSCMSVKY431HYELLNYIDL441PVLAIHGKQK
451-500451QNKRTTTFFQ461FCNADSGILL471CTDVAARGLD481IPEVDWIVQY491DPPDDPKEYI
501-550501HRVGRTARGL511NGRGHALLIL521RPEELGFLRY531LKQSKVPLNQ541FDFSWSKVSD
551-600551IQSQLEKLIE561KNYFLHKSAQ571EAYKSYIRAY581DSHSLKQIFN591VNNLNLPQVA
601-650601LSFGFKVPPF611VDLNVSSHDG621KLKKRGGGGG631FGYQKTKKVE641KSKIFKHISK
651-660651KPADRRQFSH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 138 | - | - | - |
Deep-Palm: 0.77
|
|
| 319 | - | - | - |
Deep-Palm: 0.71
|
|
| 397 | - | - | - |
Deep-Palm: 0.97
|
|
| 425 | - | - | - |
Deep-Palm: 0.15
|
|
| 462 | - | - | - |
Deep-Palm: 0.87
|
|
| 471 | - | - | - |
Deep-Palm: 0.92
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Raw 264.7
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.