Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8K3C0 | Rnasek | Ribonuclease kappa (RNase K) (RNase … | Mus musculus (Mouse) | 98 aa |
Protein Details: Q8K3C0 (Rnasek)
Protein Information
| Accession | Q8K3C0 |
|---|---|
| Protein Names | Ribonuclease kappa (RNase K) (RNase kappa) (EC 3.1.-.-) (V-type proton ATPase subunit f) (V-ATPase subunit f) |
| Gene Symbol | Rnasek |
| Organism | Mus musculus (Mouse) |
| Length | 98 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASLLCCGPK11LAACGIVLSA21WGVIMLIMLG31IFFNVHSAVL41IEDVPFTEKD
51-9851FENGPQNIYN61LYEQVSYNCF71IAAGLYLLLG81GFSFCQVRLN91KRKEYMVR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 6 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(34200797)
Forebrain
(28680068)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.19
|
| 7 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.97
Deep-Palm: 0.45
|
| 14 | Ribonuclease kappa | - | - |
Deep-Palm: 0.97
|
|
| 69 | - | - | - |
Deep-Palm: 0.74
|
|
| 85 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Liver
Specificity: 0.107
3/3 (100.0%)
2
Brain
Specificity: 0.071
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
23
Brain tissue (Mass)
Specificity: 0.821
23/56 (41.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.