Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8K3J1 | Ndufs8 | NADH dehydrogenase [ubiquinone] iron-sulfur protein … | Mus musculus (Mouse) | 212 aa |
Protein Details: Q8K3J1 (Ndufs8)
Protein Information
| Accession | Q8K3J1 |
|---|---|
| Protein Names | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (EC 7.1.1.2) (Complex I-23kD) (CI-23kD) (NADH-ubiquinone oxidoreductase 23 kDa subunit) |
| Gene Symbol | Ndufs8 |
| Organism | Mus musculus (Mouse) |
| Length | 212 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MYRLSSSMLP11RALAQAMRTG21HLNGQSLHSS31AVAATYKYVN41KKEQESEVDM
51-10051KSATDNAARI61LMWTELIRGL71GMTLSYLFRE81PATINYPFEK91GPLSPRFRGE
101-150101HALRRYPSGE111ERCIACKLCE121AICPAQAITI131EAEPRADGSR141RTTRYDIDMT
151-200151KCIYCGFCQE161ACPVDAIVEG171PNFEFSTETH181EELLYNKEKL191LNNGDKWEAE
201-212201IAANIQADYL211YR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 113 | - |
brain
(39008777)
| - |
Deep-Palm: 0.86
|
|
| 116 | - |
brain
(39008777)
| - |
Deep-Palm: 0.90
|
|
| 119 | SWISSPALM DBPTM CYSMODDB | 4Fe-4S binding domain |
Liver
(28526873)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.89
|
| 123 | SWISSPALM DBPTM CYSMODDB | 4Fe-4S binding domain |
Liver
(28526873)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.91
|
| 152 | - | - | - |
Deep-Palm: 0.21
|
|
| 155 | - | - | - |
Deep-Palm: 0.19
|
|
| 158 | - | - | - |
Deep-Palm: 0.14
|
|
| 162 | - | - | - |
Deep-Palm: 0.20
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.556
5
Liver
Specificity: 0.135
5/5 (100.0%)
4
Brain
Specificity: 0.108
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.929
26
Brain tissue (Mass)
Specificity: 0.703
26/56 (46.4%)
2
Liver tissue (Mass)
Specificity: 0.054
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.